ID A0A1F6A6S3_9BACT Unreviewed; 367 AA.
AC A0A1F6A6S3;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=RNA polymerase sigma-70 domain-containing protein {ECO:0000259|PROSITE:PS00715};
GN ORFNames=A3D03_01725 {ECO:0000313|EMBL:OGG20438.1};
OS Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_02_FULL_40_13.
OC Bacteria; Candidatus Gottesmanbacteria.
OX NCBI_TaxID=1798384 {ECO:0000313|EMBL:OGG20438.1, ECO:0000313|Proteomes:UP000177092};
RN [1] {ECO:0000313|EMBL:OGG20438.1, ECO:0000313|Proteomes:UP000177092}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27774985; DOI=10.1038/ncomms13219;
RA Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA Williams K.H., Hubbard S.S., Banfield J.F.;
RT "Thousands of microbial genomes shed light on interconnected biogeochemical
RT processes in an aquifer system.";
RL Nat. Commun. 7:13219-13219(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OGG20438.1}.
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DR EMBL; MFJN01000047; OGG20438.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1F6A6S3; -.
DR STRING; 1798384.A3D03_01725; -.
DR Proteomes; UP000177092; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF67; RNA POLYMERASE SIGMA FACTOR RPOS; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00715; SIGMA70_1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 160..173
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00715"
FT COILED 90..122
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 367 AA; 41393 MW; 488C1729948D7278 CRC64;
MPIELLKTVN LPGETSGISD APNPAFPDDF EPLTVELAEI EQGLEKDLGN HPLSETALTA
LVDDGVDLVA MYLEEIRSSP LLTKEEEIAL AQTYRKGREA REKLHKAELE HLEVEIKERE
RLTEEMETGD QAYDTLVLSN RRLVVSMAKK YIGRGLDFLD LIQEGNIGLM MGVKKFDPDR
GFRVSTYAAW WIRQTITRAI ADQSRTIRLP VSQVAKLRKM QSAIRTLQQN LGRNPNNREL
AKALKISKQD LDILLKFQRQ QPHSLNLPVG DDAEFGDFIP DTSAPTPDDS AEHTMLAPEL
SALLSLLTEK QQQVLRLRLG LDGEDEHTLD AVGKLLGLTR EGVRQIESKA LRQLRMLANK
KMLREYL
//
