ID A0A1F6NV42_9BACT Unreviewed; 441 AA.
AC A0A1F6NV42;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};
GN ORFNames=A3J93_05180 {ECO:0000313|EMBL:OGH87797.1};
OS Candidatus Magasanikbacteria bacterium RIFOXYC2_FULL_42_28.
OC Bacteria; Candidatus Magasanikbacteria.
OX NCBI_TaxID=1798704 {ECO:0000313|EMBL:OGH87797.1, ECO:0000313|Proteomes:UP000177907};
RN [1] {ECO:0000313|EMBL:OGH87797.1, ECO:0000313|Proteomes:UP000177907}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27774985; DOI=10.1038/ncomms13219;
RA Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA Williams K.H., Hubbard S.S., Banfield J.F.;
RT "Thousands of microbial genomes shed light on interconnected biogeochemical
RT processes in an aquifer system.";
RL Nat. Commun. 7:13219-13219(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OGH87797.1}.
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DR EMBL; MFQZ01000009; OGH87797.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1F6NV42; -.
DR STRING; 1798704.A3J93_05180; -.
DR Proteomes; UP000177907; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00118; LysM; 1.
DR CDD; cd12797; M23_peptidase; 1.
DR Gene3D; 2.70.70.10; Glucose Permease (Domain IIA); 1.
DR Gene3D; 3.10.350.10; LysM domain; 2.
DR InterPro; IPR011055; Dup_hybrid_motif.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR016047; Peptidase_M23.
DR PANTHER; PTHR21666:SF270; OUTER MEMBRANE ANTIGENIC LIPOPROTEIN B; 1.
DR PANTHER; PTHR21666; PEPTIDASE-RELATED; 1.
DR Pfam; PF01476; LysM; 2.
DR Pfam; PF01551; Peptidase_M23; 1.
DR SMART; SM00257; LysM; 2.
DR SUPFAM; SSF51261; Duplicated hybrid motif; 1.
DR PROSITE; PS51782; LYSM; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..42
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 62..83
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 187..231
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT DOMAIN 237..282
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
SQ SEQUENCE 441 AA; 47799 MW; 5CCC06E3D525EDB5 CRC64;
MKNIILLKTL RALIYSKRVL WWLGSGFGRV LGVIFIPVHR VFGWGHYKIG YFFKRTGLTS
SGAWWLRRSV MQMAVFVVVI VLAMPQTKLY AKRDISTVGQ DSLAFRLTSP EEKFSTEDII
VVSDNFTPDV NRQAGVVEAE MFLPGNVFDA WQDQELSAIV AGGTAFGKPI LLPGGHSLAN
STRTEPVEYI IEAGDNLGSI ANRFGVSLAT ILWENKLTER SILRLGQKII ILPVTGVTHK
VVKGDVVSKL AKTYRTEETK IIEFNKLEEN GGGLVAGNFI IIPDGVKPAS AVPASARITP
TVGNVTRPPA SAAAPTASGF VWPAGVRVIT QYYNWNHHAI DIAGGNFKTP IYASKAGTVV
VSQCGWNGGY GCYVTLDHGG GVRTIYGHNS KLLVSVGDYV GTGETIALMG NTGNVRGKTG
IHLHFEVLVN GVRKNPLSYV K
//
