ID A0A1F6Y8I7_9BACT Unreviewed; 708 AA.
AC A0A1F6Y8I7;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE RecName: Full=Type IV secretion system coupling protein TraD DNA-binding domain-containing protein {ECO:0000259|Pfam:PF10412};
GN ORFNames=A3G06_01175 {ECO:0000313|EMBL:OGJ02665.1};
OS Candidatus Nomurabacteria bacterium RIFCSPLOWO2_12_FULL_46_14.
OC Bacteria; Candidatus Nomurabacteria.
OX NCBI_TaxID=1801797 {ECO:0000313|EMBL:OGJ02665.1, ECO:0000313|Proteomes:UP000176192};
RN [1] {ECO:0000313|EMBL:OGJ02665.1, ECO:0000313|Proteomes:UP000176192}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27774985; DOI=10.1038/ncomms13219;
RA Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA Williams K.H., Hubbard S.S., Banfield J.F.;
RT "Thousands of microbial genomes shed light on interconnected biogeochemical
RT processes in an aquifer system.";
RL Nat. Commun. 7:13219-13219(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OGJ02665.1}.
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DR EMBL; MFVV01000037; OGJ02665.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1F6Y8I7; -.
DR STRING; 1801797.A3G06_01175; -.
DR Proteomes; UP000176192; Unassembled WGS sequence.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR026363; CxxC-x17-CxxC_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR019476; T4SS_TraD_DNA-bd.
DR NCBIfam; TIGR04272; cxxc_cxxc_Mbark; 1.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF10412; TrwB_AAD_bind; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
FT DOMAIN 32..349
FT /note="Type IV secretion system coupling protein TraD DNA-
FT binding"
FT /evidence="ECO:0000259|Pfam:PF10412"
FT REGION 520..615
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 646..708
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 522..536
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 541..588
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 589..615
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 653..667
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 668..687
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 694..708
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 708 AA; 78839 MW; 50A867922AFDB3F9 CRC64;
MDMPEIPQNK EITYLGLTTY RDKNNLFGIK RKDRRQHVYL LGKSGTGKSV LMFNMITQNI
RNGDGVCLVD PHGENVEAVL SVIPPERMKD VIYFNPADSD YHVGFNVLEL IDPKYKHLVA
SGLMGIFTKI WANAWSARME YILNNAILAL LDTPGTTLLG IPRMLVDKDY RQKIISNLKD
PVIKAFWVHE YEAWQDKFRN EAIAPIQNKV GQFLSTSIIR NVVGQSKSTI DIFNIMNEGK
IFLVNVSKGR IGEDNSGLLG GMIITKIQLA AMERVRIPED ERKDFYLYVD EFQNFVTDAF
AGILSEARKY RLNLTVAHQY TAQLISDKSS AVRDAVFGNV GTMIVFRVGA DDADFLEKEF
EPEFTPQDIV NLPNYKVYMK LMIDGVTSRP FSARTLPPLV KSGDKKVEDE VIEASRRLYC
RPREVVEKEI IDWSGMSLGD VGSPSPTGDK FKIICSNCGR EDTVPFKPEP GRPVYCRDCV
DKIKSGEIKP SPRSAKETKR EETRFYKPLA DLGIEFAPVA ETGSDSQGTS AAPTSFSGKK
KPARPDARLN DKVGQDSRRS GGKEDKFRPK EKPGENLALR EALSKITAED KSSLETVASP
SPSLPPISLD SLKNKSVTIP PKLTRQFSGG DRAATPEAME KLKDIISDKV PVSAPETETT
SSRPPALDNV PSPLPISPPP RPPLSVPDYT PKTAVKEVPE DVLRKILE
//
