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Database: UniProt
Entry: A0A1F7HGC6_9BACT
LinkDB: A0A1F7HGC6_9BACT
Original site: A0A1F7HGC6_9BACT 
ID   A0A1F7HGC6_9BACT        Unreviewed;       401 AA.
AC   A0A1F7HGC6;
DT   15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT   15-FEB-2017, sequence version 1.
DT   13-SEP-2023, entry version 18.
DE   RecName: Full=Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335};
DE            Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};
DE            EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};
GN   Name=rny {ECO:0000256|HAMAP-Rule:MF_00335};
GN   ORFNames=A3F29_00140 {ECO:0000313|EMBL:OGK29842.1};
OS   Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_33_9.
OC   Bacteria; Candidatus Roizmanbacteria.
OX   NCBI_TaxID=1802045 {ECO:0000313|EMBL:OGK29842.1, ECO:0000313|Proteomes:UP000177199};
RN   [1] {ECO:0000313|EMBL:OGK29842.1, ECO:0000313|Proteomes:UP000177199}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=27774985; DOI=10.1038/ncomms13219;
RA   Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA   Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA   Williams K.H., Hubbard S.S., Banfield J.F.;
RT   "Thousands of microbial genomes shed light on interconnected biogeochemical
RT   processes in an aquifer system.";
RL   Nat. Commun. 7:13219-13219(2016).
CC   -!- FUNCTION: Endoribonuclease that initiates mRNA decay.
CC       {ECO:0000256|HAMAP-Rule:MF_00335}.
CC   -!- SIMILARITY: Belongs to the RNase Y family. {ECO:0000256|HAMAP-
CC       Rule:MF_00335}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OGK29842.1}.
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DR   EMBL; MFZV01000056; OGK29842.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1F7HGC6; -.
DR   Proteomes; UP000177199; Unassembled WGS sequence.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-UniRule.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004521; F:RNA endonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006402; P:mRNA catabolic process; IEA:UniProtKB-UniRule.
DR   CDD; cd22431; KH-I_RNaseY; 1.
DR   Gene3D; 1.10.3210.10; Hypothetical protein af1432; 1.
DR   Gene3D; 3.30.1370.10; K Homology domain, type 1; 1.
DR   HAMAP; MF_00335; RNase_Y; 1.
DR   InterPro; IPR003607; HD/PDEase_dom.
DR   InterPro; IPR006674; HD_domain.
DR   InterPro; IPR006675; HDIG_dom.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR004088; KH_dom_type_1.
DR   InterPro; IPR036612; KH_dom_type_1_sf.
DR   InterPro; IPR017705; Ribonuclease_Y.
DR   InterPro; IPR022711; RNase_Y_N.
DR   NCBIfam; TIGR00277; HDIG; 1.
DR   PANTHER; PTHR12826; RIBONUCLEASE Y; 1.
DR   PANTHER; PTHR12826:SF15; RIBONUCLEASE Y; 1.
DR   Pfam; PF01966; HD; 1.
DR   Pfam; PF00013; KH_1; 1.
DR   Pfam; PF12072; RNase_Y_N; 1.
DR   SMART; SM00471; HDc; 1.
DR   SMART; SM00322; KH; 1.
DR   SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR   SUPFAM; SSF109604; HD-domain/PDEase-like; 1.
DR   PROSITE; PS51831; HD; 1.
DR   PROSITE; PS50084; KH_TYPE_1; 1.
PE   3: Inferred from homology;
KW   Endonuclease {ECO:0000256|ARBA:ARBA00022759, ECO:0000256|HAMAP-
KW   Rule:MF_00335};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|HAMAP-Rule:MF_00335};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722, ECO:0000256|HAMAP-Rule:MF_00335};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW   Rule:MF_00335}.
FT   DOMAIN          216..308
FT                   /note="HD"
FT                   /evidence="ECO:0000259|PROSITE:PS51831"
SQ   SEQUENCE   401 AA;  45204 MW;  BC3BBF8D3A875FBF CRC64;
     MADDNKTSKD DTLLDKKINE ITDKLKDKTN ITSEEAKNYV ISLWETKLKE EVAKKIRFAE
     EEVKAKAEET AKQILIDAMR FGATDYVAEY TLSTVNIPSD DFKGRIIGKD GRNIRAFELA
     SGVDVDLEEP GVIKLSSFDS VKREVARQAL EQLIRDGRIQ PGRIEEIVNK TREDLEKIMF
     KAGEELAFKV GAHNLPNEML SALGRFKFRY SYGQNMILHT LEETRIGIAL AHELKVDIET
     VRLGCLFHDI GKVISDKEGS HVELGVEFLK KHNFPEAVIG CVAAHHEDIP FPSIEAIIVY
     ISDAISGGRP GARHEDFQEY LKRIKTIEDV AKENEGVDDA YALQAGRELR VIVKPSKISD
     EEASILASKI RDELEKKFDV FPGQIKITVI REFRAESTTK I
//
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