ID A0A1F7IQ00_9BACT Unreviewed; 301 AA.
AC A0A1F7IQ00;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=Peptidase S11 D-alanyl-D-alanine carboxypeptidase A N-terminal domain-containing protein {ECO:0000259|Pfam:PF00768};
GN ORFNames=A3B40_03425 {ECO:0000313|EMBL:OGK45372.1};
OS Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_16.
OC Bacteria; Candidatus Roizmanbacteria.
OX NCBI_TaxID=1802058 {ECO:0000313|EMBL:OGK45372.1, ECO:0000313|Proteomes:UP000178040};
RN [1] {ECO:0000313|EMBL:OGK45372.1, ECO:0000313|Proteomes:UP000178040}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27774985; DOI=10.1038/ncomms13219;
RA Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA Williams K.H., Hubbard S.S., Banfield J.F.;
RT "Thousands of microbial genomes shed light on interconnected biogeochemical
RT processes in an aquifer system.";
RL Nat. Commun. 7:13219-13219(2016).
CC -!- SIMILARITY: Belongs to the peptidase S11 family.
CC {ECO:0000256|ARBA:ARBA00007164, ECO:0000256|RuleBase:RU004016}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OGK45372.1}.
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DR EMBL; MGAI01000010; OGK45372.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1F7IQ00; -.
DR Proteomes; UP000178040; Unassembled WGS sequence.
DR GO; GO:0009002; F:serine-type D-Ala-D-Ala carboxypeptidase activity; IEA:InterPro.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR GO; GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR018044; Peptidase_S11.
DR InterPro; IPR001967; Peptidase_S11_N.
DR PANTHER; PTHR21581; D-ALANYL-D-ALANINE CARBOXYPEPTIDASE; 1.
DR PANTHER; PTHR21581:SF32; D-ALANYL-D-ALANINE CARBOXYPEPTIDASE DACB; 1.
DR Pfam; PF00768; Peptidase_S11; 1.
DR PRINTS; PR00725; DADACBPTASE1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
PE 3: Inferred from homology;
KW Cell shape {ECO:0000256|ARBA:ARBA00022960};
KW Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Peptidoglycan synthesis {ECO:0000256|ARBA:ARBA00022984};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 58..277
FT /note="Peptidase S11 D-alanyl-D-alanine carboxypeptidase A
FT N-terminal"
FT /evidence="ECO:0000259|Pfam:PF00768"
FT ACT_SITE 90
FT /note="Acyl-ester intermediate"
FT /evidence="ECO:0000256|PIRSR:PIRSR618044-1"
FT ACT_SITE 93
FT /note="Proton acceptor"
FT /evidence="ECO:0000256|PIRSR:PIRSR618044-1"
FT ACT_SITE 143
FT /evidence="ECO:0000256|PIRSR:PIRSR618044-1"
FT BINDING 248
FT /ligand="substrate"
FT /evidence="ECO:0000256|PIRSR:PIRSR618044-2"
SQ SEQUENCE 301 AA; 34304 MW; DA9AB9729A9E28E6 CRC64;
MKFRFYILFL LYTLLFLFYP GESEYYKIFA YNRALFAHTE QPIKLKTEPI PYLKSPYYPS
ITAQGAYLVD LPSFTPVFEK NFQQRFIPAS TTKIITALVT ADIFQPDDIL TVKRTITEGQ
TMELVVGEKI TVENLLYGIL VHSANDAAYT IADNYGLESF LDLMNQKAKQ IAMNNSHFVD
PAGLDESNQY TSPFDLALAA RKLLENRELK KMVATKEITI SDVDFKYFHK LSNVNKLLGE
VQGIGGLKTG FTENAKENLV SFYKSGGHQF IIVILKSDDR FEDTKQIVSW VNANIDYLSI
Q
//
