ID A0A1F7T8B6_9BACT Unreviewed; 526 AA.
AC A0A1F7T8B6;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN ORFNames=A3J27_10660 {ECO:0000313|EMBL:OGL62286.1};
OS Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37.
OC Bacteria; Nitrospinae/Tectomicrobia group; Candidatus Tectomicrobia.
OX NCBI_TaxID=1802343 {ECO:0000313|EMBL:OGL62286.1, ECO:0000313|Proteomes:UP000176745};
RN [1] {ECO:0000313|EMBL:OGL62286.1, ECO:0000313|Proteomes:UP000176745}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27774985; DOI=10.1038/ncomms13219;
RA Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA Williams K.H., Hubbard S.S., Banfield J.F.;
RT "Thousands of microbial genomes shed light on interconnected biogeochemical
RT processes in an aquifer system.";
RL Nat. Commun. 7:13219-13219(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OGL62286.1}.
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DR EMBL; MGDP01000159; OGL62286.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1F7T8B6; -.
DR Proteomes; UP000176745; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 204..433
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 526 AA; 59581 MW; 93D8C309585756DE CRC64;
MPITHLTTEE RYRVISRVGH VLNSSLDLNV VLPRLAQELK AIFPLDHVAL CIINPDGKTY
SWTNITTDEG GVSLPEENVP LEGGTLGWLI EHRSDARYAI YEDLERERPF AEDEIVFKRG
IRSGIRVPLE IDNRVFGELA VASLTPRRFT GEMAQFLADL APSIATAVAN ARAYAQLEAS
RQDLYHETVL LRDELRELHN FEELIGTSGA ILKVQDLIRR AAPTEATVLI LGETGTGKEL
IARATHNLSP RRGRVLVKVN CAALQDTLLL SELFGHEKGS FTGAVERKVG RFELAHKGTI
FLDEIGELPP EAQVKVLRVM QEREFERVGG TRTVQVDTRI IAATNRDLEA EVRAGRFRTD
LFFRLNVIPI RVPPLRERKE DIPLLVEHFI RRHGPRLNRR IKAVDPRDLD RFMRYDWPGN
IRELENVVER GLVLGSGEVL RFDKQLIGEA PDEVVQEEGR EVLTTLEEYE RQYILRVLER
TGGVVSGERG AARVLGMKPT TLQSRMKKLG IRAQRKFREV NERMAG
//
