ID A0A1F9KB27_9DELT Unreviewed; 380 AA.
AC A0A1F9KB27;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN ORFNames=A3F90_19420 {ECO:0000313|EMBL:OGQ77835.1};
OS Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19.
OC Bacteria; Deltaproteobacteria.
OX NCBI_TaxID=1797894 {ECO:0000313|EMBL:OGQ77835.1, ECO:0000313|Proteomes:UP000177611};
RN [1] {ECO:0000313|EMBL:OGQ77835.1, ECO:0000313|Proteomes:UP000177611}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27774985; DOI=10.1038/ncomms13219;
RA Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA Williams K.H., Hubbard S.S., Banfield J.F.;
RT "Thousands of microbial genomes shed light on interconnected biogeochemical
RT processes in an aquifer system.";
RL Nat. Commun. 7:13219-13219(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OGQ77835.1}.
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DR EMBL; MGSS01000154; OGQ77835.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1F9KB27; -.
DR STRING; 1797894.A3F90_19420; -.
DR Proteomes; UP000177611; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 74..303
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 380 AA; 42984 MW; 6DAC10AF3AEA67DA CRC64;
MPRFDVAVLA ASELDSRKKG FLSVRKWRRR FLILDKTWAV RSRYSNGLKC SEQQTINRAL
SPFGALMEND FGQIIGKSKP LRDVLEVAKK VAPTQATVLI TGESGSGKEL IAHGIHAHSD
RHDKLFLPVN CGALPETLLE SLLFGHMKGS FTGAFANQEG LFEKARGGTI FLDEIGEIPQ
HLQVKLLRAL EAKEILPIGC TTPRRIDVRV LAATNRDLKK EVELGRFRDD LYYRLNVMEI
HIPPLRERPE DIPMLIEYLI QKHNPELKRN FKGAQPPVVR ALMSLPWKGN VRELDNVIEH
IMILADGEWI TLNDMPPALL NSDETVPPFT PDLKEAVMQF EKQHIVRVLD QVGQDRKEAA
KLLDISLSSL YRKLEELGIS
//
