ID A0A1G1L1Q8_9BACT Unreviewed; 269 AA.
AC A0A1G1L1Q8;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};
GN ORFNames=A3G33_05545 {ECO:0000313|EMBL:OGW99090.1};
OS Omnitrophica bacterium RIFCSPLOWO2_12_FULL_44_17.
OC Bacteria; Candidatus Omnitrophota.
OX NCBI_TaxID=1801832 {ECO:0000313|EMBL:OGW99090.1, ECO:0000313|Proteomes:UP000178187};
RN [1] {ECO:0000313|EMBL:OGW99090.1, ECO:0000313|Proteomes:UP000178187}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27774985; DOI=10.1038/ncomms13219;
RA Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA Williams K.H., Hubbard S.S., Banfield J.F.;
RT "Thousands of microbial genomes shed light on interconnected biogeochemical
RT processes in an aquifer system.";
RL Nat. Commun. 7:13219-13219(2016).
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OGW99090.1}.
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DR EMBL; MHFR01000015; OGW99090.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G1L1Q8; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000178187; Unassembled WGS sequence.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd00118; LysM; 1.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR Gene3D; 3.10.350.10; LysM domain; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30582:SF24; L,D-TRANSPEPTIDASE ERFK_SRFK-RELATED; 1.
DR Pfam; PF01476; LysM; 1.
DR Pfam; PF03734; YkuD; 1.
DR SMART; SM00257; LysM; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR SUPFAM; SSF54106; LysM domain; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 100..143
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
SQ SEQUENCE 269 AA; 30223 MW; 89F95CA0723E2DA9 CRC64;
MKKQIRFLTS LFVLMLWIPI LAHAEGKAVS RNPISAEKIQ KTIADAELLE NKGDLLEAKK
RLTILFRHDL EKSDKKKVKK ALESINMKIL FSPIETSGSL IYTVQEGDSL HKIAKKYGTT
IGLIKRTNHL TKDVIRPGMK FKIIKGKFSI LIDKSDNKLK LFCDDELIKT YSVTTGANNS
TPIGTFTIEM KLENPTWYTT GAIVPPNSPE NVLGTRWMGF SIPEYGIHGT TEPEAIGKQT
SKGCVRMRNE EVEELYDIVP LKTTVTVVD
//
