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Database: UniProt
Entry: A0A1G1WJI1_9BACT
LinkDB: A0A1G1WJI1_9BACT
Original site: A0A1G1WJI1_9BACT 
ID   A0A1G1WJI1_9BACT        Unreviewed;       206 AA.
AC   A0A1G1WJI1;
DT   15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT   15-FEB-2017, sequence version 1.
DT   08-NOV-2023, entry version 14.
DE   RecName: Full=YkuD domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=A2Z42_02150 {ECO:0000313|EMBL:OGY27866.1};
OS   Candidatus Woykebacteria bacterium RBG_19FT_COMBO_43_10.
OC   Bacteria; Candidatus Woykebacteria.
OX   NCBI_TaxID=1802598 {ECO:0000313|EMBL:OGY27866.1, ECO:0000313|Proteomes:UP000176645};
RN   [1] {ECO:0000313|EMBL:OGY27866.1, ECO:0000313|Proteomes:UP000176645}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=27774985; DOI=10.1038/ncomms13219;
RA   Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA   Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA   Williams K.H., Hubbard S.S., Banfield J.F.;
RT   "Thousands of microbial genomes shed light on interconnected biogeochemical
RT   processes in an aquifer system.";
RL   Nat. Commun. 7:13219-13219(2016).
CC   -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC       {ECO:0000256|ARBA:ARBA00004752}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OGY27866.1}.
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DR   EMBL; MHCU01000019; OGY27866.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1G1WJI1; -.
DR   UniPathway; UPA00219; -.
DR   Proteomes; UP000176645; Unassembled WGS sequence.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR   CDD; cd16913; YkuD_like; 1.
DR   Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR   Gene3D; 2.30.30.40; SH3 Domains; 1.
DR   InterPro; IPR005490; LD_TPept_cat_dom.
DR   InterPro; IPR003646; SH3-like_bac-type.
DR   InterPro; IPR038063; Transpep_catalytic_dom.
DR   PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR   PANTHER; PTHR30582:SF2; L,D-TRANSPEPTIDASE YCIB-RELATED; 1.
DR   Pfam; PF08239; SH3_3; 1.
DR   Pfam; PF03734; YkuD; 1.
DR   SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
PE   4: Predicted;
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          4..39
FT                   /note="SH3b"
FT                   /evidence="ECO:0000259|Pfam:PF08239"
FT   DOMAIN          89..203
FT                   /note="L,D-transpeptidase catalytic"
FT                   /evidence="ECO:0000259|Pfam:PF03734"
SQ   SEQUENCE   206 AA;  23289 MW;  A66A9BFB360DD2B3 CRC64;
     MDNGVVVRAA PTSESQQVGT LGFGEEVKIL SVVNGQMWYN HNQYISPFGP FSDLADDWYE
     IEPGKYVYSA FVFIPKEGEP PPSVSCENKW VEVDRANQTL HAFCDGVDIF QAPVGVGLPW
     TPTPLGEYSV WTRIFNETMS GADYYVQNIL FTQYFTSAGH ALHLDWWHGD SYFGNQPTSH
     GCVGLQIHNS QWIWLFGFTG MRVKIY
//
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