ID A0A1G2C5T1_9BACT Unreviewed; 361 AA.
AC A0A1G2C5T1;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=RNA polymerase sigma-70 domain-containing protein {ECO:0000259|PROSITE:PS00716};
GN ORFNames=A2128_01220 {ECO:0000313|EMBL:OGY96764.1};
OS Candidatus Liptonbacteria bacterium GWC1_60_9.
OC Bacteria; Candidatus Liptonbacteria.
OX NCBI_TaxID=1798645 {ECO:0000313|EMBL:OGY96764.1, ECO:0000313|Proteomes:UP000176349};
RN [1] {ECO:0000313|EMBL:OGY96764.1, ECO:0000313|Proteomes:UP000176349}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27774985; DOI=10.1038/ncomms13219;
RA Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA Williams K.H., Hubbard S.S., Banfield J.F.;
RT "Thousands of microbial genomes shed light on interconnected biogeochemical
RT processes in an aquifer system.";
RL Nat. Commun. 7:13219-13219(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OGY96764.1}.
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DR EMBL; MHKV01000035; OGY96764.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G2C5T1; -.
DR Proteomes; UP000176349; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 2.
DR Gene3D; 1.10.220.120; Sigma-70 factor, region 1.1; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR007127; RNA_pol_sigma_70_r1_1.
DR InterPro; IPR042189; RNA_pol_sigma_70_r1_1_sf.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC; 1.
DR Pfam; PF03979; Sigma70_r1_1; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 323..349
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00716"
SQ SEQUENCE 361 AA; 41527 MW; 3CE8EFFEC84E1B70 CRC64;
MFDERKLGEL IQRGRPRGFV TDTEILYYFP NIEKDISFLE KIYERLEAAN IKVIETSQLI
EVPRGKEEVS EKELLEATRI TGGTAEVPDA VQMYLKEIGK TPLLTAQEER DLAKRSEKGD
EEARQRLITA NLRLVVSIAK RYVNRTPNLS ILDLIQEGNI GLSRAVEKFD YRRGFKFSTY
ATWWIRQAIT RALADQSRTI RIPVHMVETI SKYTQAKRRL MQELGREPLP EEIAIEMGIS
VEKVHHIQKI SQEVISLESP VGDDDDDSSL SEFIQDERNL TPAQIASQAL LRDRIHDILI
DLSDREQSIL RLRFGLEDGV THTLEEVGKV FNVTRERIRQ IEAKALEKVK EHKKSAGLES
Y
//
