ID A0A1G4K8D5_9SACH Unreviewed; 983 AA.
AC A0A1G4K8D5;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=LAMI_0G04016g1_1 {ECO:0000313|EMBL:SCV00280.1};
GN ORFNames=LAMI_0G04016G {ECO:0000313|EMBL:SCV00280.1};
OS Lachancea mirantina.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Lachancea.
OX NCBI_TaxID=1230905 {ECO:0000313|EMBL:SCV00280.1, ECO:0000313|Proteomes:UP000191024};
RN [1] {ECO:0000313|EMBL:SCV00280.1, ECO:0000313|Proteomes:UP000191024}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS 11717 {ECO:0000313|EMBL:SCV00280.1};
RA Devillers H.;
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the DNA2/NAM7 helicase family.
CC {ECO:0000256|ARBA:ARBA00007913}.
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DR EMBL; LT598469; SCV00280.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G4K8D5; -.
DR STRING; 1230905.A0A1G4K8D5; -.
DR OrthoDB; 170190at2759; -.
DR Proteomes; UP000191024; Chromosome g.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR CDD; cd21407; 1B_UPF1-like; 1.
DR CDD; cd18039; DEXXQc_UPF1; 1.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR CDD; cd21400; ZBD_UPF1-like; 1.
DR Gene3D; 2.40.30.230; -; 1.
DR Gene3D; 6.10.140.1240; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR047187; SF1_C_Upf1.
DR InterPro; IPR040812; UPF1_1B_dom.
DR InterPro; IPR018999; UPF1_CH/ZBD.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF364; REGULATOR OF NONSENSE TRANSCRIPTS 1; 1.
DR Pfam; PF13086; AAA_11; 2.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF18141; UPF1_1B_dom; 1.
DR Pfam; PF09416; UPF1_Zn_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51997; UPF1_CH_RICH; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU01341}; Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000191024};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU01341};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU01341}.
FT DOMAIN 51..205
FT /note="Upf1"
FT /evidence="ECO:0000259|PROSITE:PS51997"
FT REGION 59..91
FT /note="C3H"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01341"
FT REGION 73..101
FT /note="CC/SHH/C"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01341"
FT REGION 119..149
FT /note="C4"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01341"
SQ SEQUENCE 983 AA; 110512 MW; 73F91121245D7179 CRC64;
MASENEHFTS QTVDSKINGN DVHNEEFYTY SDDDLIEDFT QEHEELGNTA IRTESEYACA
YCGIDSPKCV AKCNTCNKWF CNSRNGTSSS HIINHLVLSH HNVVSLHPES DLGDTVLECY
NCGCKNAFVL GFVSAKTEAV VVLLCRLPCA QTKNINWDTD QWQSLIENRQ FLSWVAEEPG
EDELLKARII TPAQISKLEA KWRSNKDATI NDIESQDEQE QVTHVLMRYT DAYQYQRSFG
PLVKLEADYD KQLKESQALE HISVSWSLGM NKRHLASFAL STFESNGLKV AVGDEMILRY
SGLQFPEWEG RGYIVPLPNS FQDEFTLELK ASKNAPPTNM TTGFTAEFVW KGTSYDRMQE
AMKKFAVVKK SISGFLYYKI LGHEVPDLEF DVNLPEQFSI PHFAQLNVSQ ANAVRHVLQR
PLSLIQGPPG TGKTVTSATI VYHLSRLHKE RILVCAPSNV AVDHLASKLR DLGLKVVRLT
AKSREDVESS VSDLGLHNLV SRSAKGELKK LLKIKEESGE LSSIETKKFV KQVKKSEVEI
LKKADVVCCT CVGAGDRRLE AKFRTVLIDE STQASEPECL IPIVKGAKQV ILVGDHQQLG
PVILDRKAAD AGLRQSLFER LISLGHTPIR LEVQYRMNPH LSEFPSNMFY EGSLQNGVTI
EQRTIAKSTF PWPIHDVPMM FWSNYGREEI SGNGTSYLNR IEAMNCERVI TRLFRDGVNP
EQIGVITPYE GQRAYIVQYM QMNGSLDKEL YMNVEVASVD AFQGREKDYI ILSCVRANEQ
QAIGFLSDPR RLNVALTRAK YGLVILGNPK SLSRNSLWSH LLIHFREQGC LVEGSLDNLQ
LCTVQLTKTR TTPNERRMIS QRLDLSQAGS FNQMGFDDVD TQSLISFGGP ENFGSNGFEA
LHKEQDTKIV NSSIWQAEAF QQRFGGKEQP GANVYSEKFG LDSSLARGLQ NNNGAFSKYD
YKGPDGDDRM KGLHSFRELN ISG
//