ID A0A1G5ZI13_9BACT Unreviewed; 468 AA.
AC A0A1G5ZI13;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Superfamily II DNA and RNA helicase {ECO:0000313|EMBL:SDA94235.1};
GN ORFNames=SAMN03080617_03872 {ECO:0000313|EMBL:SDA94235.1};
OS Algoriphagus alkaliphilus.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC Algoriphagus.
OX NCBI_TaxID=279824 {ECO:0000313|EMBL:SDA94235.1, ECO:0000313|Proteomes:UP000198756};
RN [1] {ECO:0000313|EMBL:SDA94235.1, ECO:0000313|Proteomes:UP000198756}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22703 {ECO:0000313|EMBL:SDA94235.1,
RC ECO:0000313|Proteomes:UP000198756};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|RuleBase:RU000492}.
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DR EMBL; FMXE01000039; SDA94235.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G5ZI13; -.
DR STRING; 279824.SAMN03080617_03872; -.
DR OrthoDB; 9785240at2; -.
DR Proteomes; UP000198756; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47959:SF13; ATP-DEPENDENT RNA HELICASE RHLE; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU000492};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU000492};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU000492};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU000492}.
FT DOMAIN 1..29
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 32..206
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 228..381
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 367..468
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 1..29
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
FT COMPBIAS 409..451
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 468 AA; 51874 MW; 7322E9CA322F3826 CRC64;
MSFINFNFEP SLQEGLDAMG FDRPTPIQEM AIPVIMQGKD LIACAQTGTG KTAAFVLPIL
NKISKSGSNK LNTLILAPTR ELAIQIDQQI QGFSYFLGVS SVPIYGGGDG IVWEQQKKAL
ETGAEIVVAT PGRLIALLAG GKMDLSTLEH LVLDEADRMM DMGFSDDILK IVNYLPQKRQ
TVLFSATMPP KIRQFSMKFL HNPEEISLSI GKTAEGVTQS MYSVYDGQKE ELVRHILSQK
AYESVIIFAS TKDKVKALYK VLRKEFDIEA FHSDLEQLER EKIMSNFKNK AVKILIGTDI
ISRGIDVVGI ELIINYDTPS DPEDYVHRVG RTARADKEGE AITFVNPKDQ HKFVRIESLI
GMEITRNPMP EGFERGPEYL GEKAKSSGFS SGGDGKSKNK KKKKPGNKPA GEKRNSESGF
KPRADFKNAP PAHKQEAPKQ EAKKTEPSDT PKSETPSKYG QRKNVIDS
//