ID A0A1G6MSS0_9ACTN Unreviewed; 406 AA.
AC A0A1G6MSS0;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:SDC58501.1};
GN ORFNames=SAMN05421872_10310 {ECO:0000313|EMBL:SDC58501.1};
OS Nocardioides lianchengensis.
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Nocardioidaceae; Nocardioides.
OX NCBI_TaxID=1045774 {ECO:0000313|EMBL:SDC58501.1, ECO:0000313|Proteomes:UP000199034};
RN [1] {ECO:0000313|EMBL:SDC58501.1, ECO:0000313|Proteomes:UP000199034}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CGMCC 4.6858 {ECO:0000313|EMBL:SDC58501.1,
RC ECO:0000313|Proteomes:UP000199034};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
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DR EMBL; FMZM01000003; SDC58501.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G6MSS0; -.
DR STRING; 1045774.SAMN05421872_10310; -.
DR Proteomes; UP000199034; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR046531; DUF6596.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR47756:SF2; BLL6612 PROTEIN; 1.
DR PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR Pfam; PF20239; DUF6596; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000199034};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 9..67
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 106..156
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 174..274
FT /note="DUF6596"
FT /evidence="ECO:0000259|Pfam:PF20239"
SQ SEQUENCE 406 AA; 43578 MW; D05C623DF3E85A6E CRC64;
MWRIESAHIV ATLARYTGDF ALAEDLAQEA LAEALVGWPR DGVPANPAGW LLTVGRRRAI
DGFRRRAARD ERYAALARDP GADQPADPDL LWDPDRIEDD ALALLFVSCH PALSPESQVA
LTLRVLGGLT SDEIARGFLV PTATVQARIT RAKKTLAAAR VPFEVPPAAE RRERLGPVLS
VLYLIFTEGS SATSGRDLIR VDLAVEATRL ARVLARLVSE EPEVHGLLAL LELTAARFPA
RLDAAGDPVL LEDQDRRRWD HAAIRRGRAA LARAGQVGRG LGAYGVQAAI AECHAVAPSV
AATDWERVVL LYEALGRLAP SPVVALNRAV ALAMAEGPAA ALAAVDELVA EGRLAGSHLL
PSVRGELLTR LGRADEARAE LEAAVVLCPQ ERERRLLRRK IVALGG
//
