ID A0A1G7D3M0_9BURK Unreviewed; 726 AA.
AC A0A1G7D3M0;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=DNA polymerase-3 subunit epsilon {ECO:0000313|EMBL:SDE46107.1};
GN ORFNames=SAMN05444679_12318 {ECO:0000313|EMBL:SDE46107.1};
OS Variovorax sp. CF079.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=1882774 {ECO:0000313|EMBL:SDE46107.1, ECO:0000313|Proteomes:UP000198763};
RN [1] {ECO:0000313|EMBL:SDE46107.1, ECO:0000313|Proteomes:UP000198763}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF079 {ECO:0000313|EMBL:SDE46107.1,
RC ECO:0000313|Proteomes:UP000198763};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FMZU01000023; SDE46107.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G7D3M0; -.
DR STRING; 1882774.SAMN05444679_12318; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000198763; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000198763};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 49..67
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 535..703
FT /note="Exonuclease"
FT /evidence="ECO:0000259|SMART:SM00479"
SQ SEQUENCE 726 AA; 78471 MW; 361906C5DDDF8C39 CRC64;
MKIDAHQFAV ALAPGALLAL LGLGLGAIFA ATLAPDERAV LGEMIAPRVP LLVLGWAVLA
IALGALARRA HAIWVTEPAR LAEAAQATAA GGAPHRSAPP AEAACGAGAR ALAGVVDELA
RQRDGLRADI DARVQEAARG IEQERSRLAA LMSELTQSVV VCNLDGRILL YNNRARLQSR
ALSSVPALAD GAELIGLGRS IYALFDRELI AHALESVQRR LLRGAPQPSA QFVTSSQAGQ
LLRVQLAPVR DPSAVPGDAA QLSGFVLMLQ NITREFEEDA EQDRLLHGLT EGSRSSLGSL
QAAVDMLELP DLDAPTRERF LRVVHDEVRA MTARLQSLAA SASQGLKTRW PLEDMLGADL
VQAALRLIEA RSGARASAPE VDAGLWLRVD SYALLQALAS LATRLVDEFA VKRVQLRLRR
AGERAHLDLV WAGTAISTET VTSWESSPMT VGDRASPLSV RDVVERHGGE FWFQRERALQ
TTFFRFLLPL APPQEQLEAA AVLRSESRPE YYDFDLFQPG IQARELDERR LVDLAYTVFD
TETTGLDPSQ GDEIIQIGAA RIVNGKLLRQ ESFEQLIDPG RSIPAAGIPI HGITPAMVAG
QPGIAEILPI FHAFANDTVL VAHNAAFDMR FLQLKEASTG VRFDQPVLDT LLLSAVANPH
QASHELEAIA ERFGIAVLGR HTALGDAILT AEVFLRLIPL LADKGVHTLG QAREAAQRTW
YARLKY
//