ID A0A1G8DKL8_9VIBR Unreviewed; 273 AA.
AC A0A1G8DKL8;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE SubName: Full=D-amino peptidase {ECO:0000313|EMBL:SDH58243.1};
GN ORFNames=SAMN04488136_12044 {ECO:0000313|EMBL:SDH58243.1};
OS Vibrio xiamenensis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=861298 {ECO:0000313|EMBL:SDH58243.1, ECO:0000313|Proteomes:UP000198854};
RN [1] {ECO:0000313|EMBL:SDH58243.1, ECO:0000313|Proteomes:UP000198854}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CGMCC 1.10228 {ECO:0000313|EMBL:SDH58243.1,
RC ECO:0000313|Proteomes:UP000198854};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FNDD01000020; SDH58243.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G8DKL8; -.
DR STRING; 861298.SAMN04488136_12044; -.
DR OrthoDB; 9785420at2; -.
DR Proteomes; UP000198854; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd08663; DAP_dppA_1; 1.
DR Gene3D; 3.30.1360.130; Dipeptide transport protein; 1.
DR Gene3D; 3.40.50.10780; Dipeptide transport protein; 1.
DR InterPro; IPR027476; DppA_N.
DR InterPro; IPR007035; Peptidase_M55.
DR InterPro; IPR036177; Peptidase_M55_sf.
DR Pfam; PF04951; Peptidase_M55; 1.
DR PIRSF; PIRSF015853; Pep_DppA; 1.
DR SUPFAM; SSF63992; Dipeptide transport protein; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PIRSR:PIRSR015853-2};
KW Reference proteome {ECO:0000313|Proteomes:UP000198854};
KW Zinc {ECO:0000256|PIRSR:PIRSR015853-2}.
FT ACT_SITE 116
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PIRSR:PIRSR015853-1"
FT BINDING 8
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000256|PIRSR:PIRSR015853-2"
FT BINDING 8
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000256|PIRSR:PIRSR015853-2"
FT BINDING 10
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000256|PIRSR:PIRSR015853-2"
FT BINDING 60
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000256|PIRSR:PIRSR015853-2"
FT BINDING 105
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000256|PIRSR:PIRSR015853-2"
FT BINDING 135
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000256|PIRSR:PIRSR015853-2"
SQ SEQUENCE 273 AA; 29277 MW; 80304D589E7D6CEF CRC64;
MKIFISADIE GIAGVCAPEQ CRAGNIEYEK ARALMEQEVN AAIAGAFEAG ATHVVVADSH
GSMTNLRSAY LDPRAELIQS KPRPFSMVEG IDHQHFDGLF LIGYHSAAGE QGVLAHTING
AAFYRVTVNG LAMAEADLYS ASALEHGTPL LLVSGDDKLQ SWIEKRYPGV SYCCVKRAIT
TTSAQSLSPQ SAQQQIHAAA FEAVNRLTTT ANTLLKPPYH LQLEATKPVM ADVFALIPGV
EQLDARTVSY TASEMKTLIS LLGAFSYLAS TQS
//