ID A0A1G9B104_9PSED Unreviewed; 713 AA.
AC A0A1G9B104;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=DNA polymerase-3 subunit epsilon {ECO:0000313|EMBL:SDK33207.1};
GN ORFNames=SAMN05216186_106105 {ECO:0000313|EMBL:SDK33207.1};
OS Pseudomonas indica.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=137658 {ECO:0000313|EMBL:SDK33207.1, ECO:0000313|Proteomes:UP000198706};
RN [1] {ECO:0000313|EMBL:SDK33207.1, ECO:0000313|Proteomes:UP000198706}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 21544 {ECO:0000313|EMBL:SDK33207.1,
RC ECO:0000313|Proteomes:UP000198706};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FNFD01000006; SDK33207.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G9B104; -.
DR STRING; 137658.SAMN05216186_106105; -.
DR Proteomes; UP000198706; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000198706};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..31
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 51..71
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 520..690
FT /note="Exonuclease"
FT /evidence="ECO:0000259|SMART:SM00479"
FT COILED 105..150
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 713 AA; 79169 MW; FDC12933A92EDD2E CRC64;
MQPKVRFVLH FAWLGVLSVA LLGFAGLVLW IDLSPAERHT LRSILAERAA LLVVLAGLLG
AVLAGLLRQW LVAYPQNAQR ITEEIGIIHR VNAEHRLKPS GPVEMRKLGE ALNEFAEVYD
QQQREVEARI EETNGRLEQE KNRLATLMSE LAQSVLVCNN EGRILLYNPR ATQLLAGDAS
APGGMPVGLG RSIFAVLDKS LITHALEQIR HRLDQQAAKP VAHFVAARAG HLLRAQMAPV
LDQQGESIGF VLILEDITRT VEINSRRDLL LQQLTEGSRS ALANIRAAVE TLEQYPDMDS
ERRERFTEVI RDEAERLTQR LEQSLSRHAD LLGSPWPLED MLASDLAAAL QRNFAAALGL
RMRCEVGEQP LWLSVDSYSL VQVLTQVMGA LASACRTREI GLELSTEGRC VRLSLSWGGQ
PLDPNLLHEW EELPLNLGGE GENGATLKSV VARHGGEVWC QLDRAAGVNR LCLQLPRIQP
EALPEPLEPS QGRPVYYDFD LFNQPGQTAE LDERPLSELS YTVFDTETTG LSPSDGDEII
SIGAVRVVNG RLLRQECFDR LIKPSRPISK ASQEVHGLTP QMLADQPPIE QVLPQFHRFA
EDTVLVAHNA AFDMRFLQLK EAQTGVTFIQ PVLDTLLLSA LAHPGHLDDE HRLERIATRL
GVEVIGRHTA LGDAIVTAEV LLKLIPLLAE RGIHNLRQAR EASRKTLYAR VKY
//
