ID   A0A1G9FY25_9RHOB        Unreviewed;       407 AA.
AC   A0A1G9FY25;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   27-MAR-2024, entry version 23.
DE   SubName: Full=Heme d1 biosynthesis radical SAM protein NirJ {ECO:0000313|EMBL:SDK93326.1};
GN   ORFNames=SAMN04487971_104143 {ECO:0000313|EMBL:SDK93326.1};
OS   Paracoccus chinensis.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Paracoccaceae; Paracoccus.
OX   NCBI_TaxID=525640 {ECO:0000313|EMBL:SDK93326.1, ECO:0000313|Proteomes:UP000199555};
RN   [1] {ECO:0000313|EMBL:SDK93326.1, ECO:0000313|Proteomes:UP000199555}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CGMCC 1.7655 {ECO:0000313|EMBL:SDK93326.1,
RC   ECO:0000313|Proteomes:UP000199555};
RA   de Groot N.N.;
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC         Evidence={ECO:0000256|ARBA:ARBA00001966};
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DR   EMBL; FNGE01000004; SDK93326.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1G9FY25; -.
DR   STRING; 525640.SAMN04487971_104143; -.
DR   OrthoDB; 9792276at2; -.
DR   Proteomes; UP000199555; Unassembled WGS sequence.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   CDD; cd01335; Radical_SAM; 1.
DR   CDD; cd21123; SPASM_MftC-like; 1.
DR   Gene3D; 3.20.20.70; Aldolase class I; 1.
DR   InterPro; IPR013785; Aldolase_TIM.
DR   InterPro; IPR023992; HemeD1_Synth_NirJ.
DR   InterPro; IPR017200; PqqE-like.
DR   InterPro; IPR007197; rSAM.
DR   NCBIfam; TIGR04051; rSAM_NirJ; 1.
DR   PANTHER; PTHR11228:SF7; PQQA PEPTIDE CYCLASE; 1.
DR   PANTHER; PTHR11228; RADICAL SAM DOMAIN PROTEIN; 1.
DR   Pfam; PF13353; Fer4_12; 1.
DR   Pfam; PF04055; Radical_SAM; 1.
DR   PIRSF; PIRSF037420; PQQ_syn_pqqE; 1.
DR   SFLD; SFLDF00393; heme_D1_biosynthesis_(NirJ-lik; 1.
DR   SFLD; SFLDG01386; main_SPASM_domain-containing; 1.
DR   SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR   PROSITE; PS51918; RADICAL_SAM; 1.
PE   4: Predicted;
KW   Iron {ECO:0000256|ARBA:ARBA00023004};
KW   Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691}.
FT   DOMAIN          24..242
FT                   /note="Radical SAM core"
FT                   /evidence="ECO:0000259|PROSITE:PS51918"
SQ   SEQUENCE   407 AA;  45298 MW;  7DCCFC7A048605D9 CRC64;
     MFRLTQYMHQ LVEPTPVRRR GNPGSVKPVV IWNLTRTCNL KCRHCYTVSS DHVFPGELTH
     EQALGVLDDL SAFRIPALIL SGGEPLSRFD FWELAERARQ LDFRHLSLST NGTKLGEPGV
     ADRVAALGFD YVGISLDGIG ATNDWFRGVQ GAFANALAGV RACKARGVKV GLRFTITKDN
     GDQLPLMLDL CESEGVDKFY LSHLVYAGRG DKHRGEDQEH AHTRRAMDLL IERGWDAVSN
     GRPLEIVTGN NDADAVWFMR WAERNFDAAT VAHVREHLVA WGGNSSGLGV ANIDPQGKVH
     PDTYWSDYTV GSVKEKPFTE WWTGDDPMLA TLRTRPRPLK GRCGACAFKD VCGGNTRIRA
     LQLTGDPWAE DPACYLSNAE IGVEDDLERL TVRPFRGKSH DPAHRFF
//