ID A0A1G9HCU9_9BACT Unreviewed; 318 AA.
AC A0A1G9HCU9;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE SubName: Full=Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains {ECO:0000313|EMBL:SDL10739.1};
GN ORFNames=SAMN04488090_0002 {ECO:0000313|EMBL:SDL10739.1};
OS Siphonobacter aquaeclarae.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae;
OC Siphonobacter.
OX NCBI_TaxID=563176 {ECO:0000313|EMBL:SDL10739.1, ECO:0000313|Proteomes:UP000198901};
RN [1] {ECO:0000313|EMBL:SDL10739.1, ECO:0000313|Proteomes:UP000198901}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 21668 {ECO:0000313|EMBL:SDL10739.1,
RC ECO:0000313|Proteomes:UP000198901};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FNGS01000001; SDL10739.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1G9HCU9; -.
DR STRING; 563176.SAMN04488090_0002; -.
DR OrthoDB; 9815009at2; -.
DR Proteomes; UP000198901; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR028349; PafC.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF3; REGULATORY PROTEIN-RELATED; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR PIRSF; PIRSF016838; PafC; 1.
DR SMART; SM00420; HTH_DEOR; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:SDL10739.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000198901};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 6..62
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 318 AA; 37327 MW; 7832250DEAFA8BA6 CRC64;
MEITRRFDRI LRLFFVLQSR SVVSIEELQN RFDASKRTIY RDLNALQAAG VPIVQEHGVG
YSIMEGYRIQ PSRFTPEEIL SLTIAEKVMQ GHQTQFIKTN FESALTKIKG SFELRQKDQV
QSLEDKLLFA DQTRTTEYLP DIIDVLLKST VTQKIAHIQY IKSSGTDAVS REIEAVGVFY
QNQFWYVLAY CHLRQDYRNF RLDRIREVRL SGKGFTRKHP PVDELRRQDI AAYATRIVIH
VDREFAHYLF WERQVFGYER EERVDGHVVM YFTCRMHPTA FVRWFLKYVD IGHIAEPEGL
QEEALAIVRA GLKRNPVA
//