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Database: UniProt
Entry: A0A1H0Z4Y5_9GAMM
LinkDB: A0A1H0Z4Y5_9GAMM
Original site: A0A1H0Z4Y5_9GAMM 
ID   A0A1H0Z4Y5_9GAMM        Unreviewed;       184 AA.
AC   A0A1H0Z4Y5;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:SDQ22519.1};
GN   ORFNames=SAMN05216569_0175 {ECO:0000313|EMBL:SDQ22519.1};
OS   Pseudoxanthomonas sp. CF125.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Pseudoxanthomonas.
OX   NCBI_TaxID=1855303 {ECO:0000313|EMBL:SDQ22519.1, ECO:0000313|Proteomes:UP000199049};
RN   [1] {ECO:0000313|EMBL:SDQ22519.1, ECO:0000313|Proteomes:UP000199049}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CF125 {ECO:0000313|EMBL:SDQ22519.1,
RC   ECO:0000313|Proteomes:UP000199049};
RA   de Groot N.N.;
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|ARBA:ARBA00010641}.
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DR   EMBL; FNLD01000001; SDQ22519.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1H0Z4Y5; -.
DR   STRING; 1855303.SAMN05216569_0175; -.
DR   OrthoDB; 9784272at2; -.
DR   Proteomes; UP000199049; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR43133:SF55; BLR4028 PROTEIN; 1.
DR   PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000199049};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          27..93
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          131..180
FT                   /note="RNA polymerase sigma-70 region 4"
FT                   /evidence="ECO:0000259|Pfam:PF04545"
SQ   SEQUENCE   184 AA;  21688 MW;  B2842838104C9EFA CRC64;
     MNDFSEPADE TLMLAYAGGD MAAFEQLYAR HRTRLYRFLL RQLRDQALAD EFFQDVWQRV
     ITAREGWKPE AAFTTWLFRI AHNRLTDHWR ALKHRPPAPV DGDERAARVP DPETPERILS
     DFEQRRRLQL ALAELPDDQR EVLQLRLEQE LTLEEIGEIT GVGRETVKSR LRYAMDKLRA
     RLSE
//
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