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Database: UniProt
Entry: A0A1H1QTP6_9FLAO
LinkDB: A0A1H1QTP6_9FLAO
Original site: A0A1H1QTP6_9FLAO 
ID   A0A1H1QTP6_9FLAO        Unreviewed;       470 AA.
AC   A0A1H1QTP6;
DT   18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT   18-JAN-2017, sequence version 1.
DT   24-JAN-2024, entry version 22.
DE   SubName: Full=23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:SDS26862.1};
GN   ORFNames=SAMN04515667_1790 {ECO:0000313|EMBL:SDS26862.1};
OS   Formosa sp. Hel1_31_208.
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Formosa.
OX   NCBI_TaxID=1798225 {ECO:0000313|EMBL:SDS26862.1, ECO:0000313|Proteomes:UP000199458};
RN   [1] {ECO:0000313|EMBL:SDS26862.1, ECO:0000313|Proteomes:UP000199458}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hel1_31_208 {ECO:0000313|EMBL:SDS26862.1,
RC   ECO:0000313|Proteomes:UP000199458};
RA   de Groot N.N.;
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC       superfamily. RNA M5U methyltransferase family. {ECO:0000256|PROSITE-
CC       ProRule:PRU01024}.
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DR   EMBL; LT629733; SDS26862.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1H1QTP6; -.
DR   STRING; 1798225.SAMN04515667_1790; -.
DR   OrthoDB; 9804590at2; -.
DR   Proteomes; UP000199458; Chromosome i.
DR   GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR   GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:InterPro.
DR   GO; GO:0034470; P:ncRNA processing; IEA:UniProt.
DR   GO; GO:0001510; P:RNA methylation; IEA:GOC.
DR   CDD; cd02440; AdoMet_MTases; 1.
DR   Gene3D; 2.40.50.1070; -; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR   InterPro; IPR030390; MeTrfase_TrmA_AS.
DR   InterPro; IPR030391; MeTrfase_TrmA_CS.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   InterPro; IPR002792; TRAM_dom.
DR   InterPro; IPR010280; U5_MeTrfase_fam.
DR   NCBIfam; TIGR00479; rumA; 1.
DR   PANTHER; PTHR11061:SF48; 23S RRNA (URACIL(747)-C(5))-METHYLTRANSFERASE RLMC; 1.
DR   PANTHER; PTHR11061; RNA M5U METHYLTRANSFERASE; 1.
DR   Pfam; PF05958; tRNA_U5-meth_tr; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR   PROSITE; PS51687; SAM_MT_RNA_M5U; 1.
DR   PROSITE; PS50926; TRAM; 1.
DR   PROSITE; PS01230; TRMA_1; 1.
DR   PROSITE; PS01231; TRMA_2; 1.
PE   3: Inferred from homology;
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW   ProRule:PRU01024}; Reference proteome {ECO:0000313|Proteomes:UP000199458};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW   ECO:0000256|PROSITE-ProRule:PRU01024};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW   ProRule:PRU01024}.
FT   DOMAIN          4..64
FT                   /note="TRAM"
FT                   /evidence="ECO:0000259|PROSITE:PS50926"
FT   ACT_SITE        428
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU10015"
FT   ACT_SITE        428
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         302
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         331
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         352
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         401
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
SQ   SEQUENCE   470 AA;  53763 MW;  C0C86807C397C71F CRC64;
     MARRNNKRQI FENIEVIDAG AKGKTVAKAP DGRVIFLPNA VPGDVVDVQT FKKRKAYFEG
     KAIKFHKLSE KRTDAKCEHF GVCGGCKWQD MDYRFQLEYK QKEVTNNLVR LGHLELPEVT
     PILGSTEQYF YRNKMEFSFS DSRWLTIEEV QSDEDLGDRN ALGFHIPGMW DKILDINKCW
     LQADPSNAIR NEVKAFAVSN GLEFFNTRHQ TGFLRTLMIR TATTGDLMVL IQFFKEDKEK
     RELLLNHLAD TFPEISSLQY VINGKANDTI YDQDVICHKG NDHIFEEMEG LRFKINAKSF
     YQTNSAQAYE LYKITRNFAE LNGDELVYDL YTGTGTIAQF IAKQAKHVIG VEAVPDAIKA
     AKENAQLNRI ENVDFFVGDM KTVFNTQFIT EHGHPDVIIT DPPRDGMHKD VVNQILNIAP
     KKIVYVSCNS ATQARDLALM KADYQITKTQ AVDMFPQTHH VENVVLLEKR
//
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