GenomeNet

Database: UniProt
Entry: A0A1H1YKJ2_9ACTN
LinkDB: A0A1H1YKJ2_9ACTN
Original site: A0A1H1YKJ2_9ACTN 
ID   A0A1H1YKJ2_9ACTN        Unreviewed;       264 AA.
AC   A0A1H1YKJ2;
DT   18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT   18-JAN-2017, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   SubName: Full=RNA polymerase sigma-B factor {ECO:0000313|EMBL:SDT21970.1};
GN   ORFNames=SAMN04489716_2894 {ECO:0000313|EMBL:SDT21970.1};
OS   Actinoplanes derwentensis.
OC   Bacteria; Actinomycetota; Actinomycetes; Micromonosporales;
OC   Micromonosporaceae; Actinoplanes.
OX   NCBI_TaxID=113562 {ECO:0000313|EMBL:SDT21970.1, ECO:0000313|Proteomes:UP000198688};
RN   [1] {ECO:0000313|EMBL:SDT21970.1, ECO:0000313|Proteomes:UP000198688}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 43941 {ECO:0000313|EMBL:SDT21970.1,
RC   ECO:0000313|Proteomes:UP000198688};
RA   de Groot N.N.;
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LT629758; SDT21970.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1H1YKJ2; -.
DR   STRING; 113562.SAMN04489716_2894; -.
DR   OrthoDB; 9804285at2; -.
DR   Proteomes; UP000198688; Chromosome i.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.20.120.1810; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02980; SigBFG; 1.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR30385:SF4; RNA POLYMERASE SIGMA FACTOR SIGO; 1.
DR   PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000198688};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          45..113
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          124..189
FT                   /note="RNA polymerase sigma-70 region 3"
FT                   /evidence="ECO:0000259|Pfam:PF04539"
FT   DOMAIN          208..256
FT                   /note="RNA polymerase sigma-70 region 4"
FT                   /evidence="ECO:0000259|Pfam:PF04545"
FT   REGION          1..22
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   264 AA;  28821 MW;  DB4B521E1A9C8BF5 CRC64;
     MTVMTDTAVR RESATSAEPA SELINTMAAL PAGHPSRPRL RDQAIEAWMP LARHLANRYA
     NRGEPRDDLH QVALLGLIKA VDRFEADRGV DFAGFAIPTI VGELKRHFRD KTWSVRVPRR
     LQELRLAITG ANSTLSHTLG RSPTVTDIAD YLNISEDEVL EGLEGARAYN STSLATPVTE
     GGTELGETLG GEDTGFELAE LRIAIGPALA TLDEREQKIV SLRFYGNLTQ SQIADQIGIS
     QMHVSRLLAK ALAKLRTQLD GAMV
//
DBGET integrated database retrieval system