ID A0A1H2WIF6_9FLAO Unreviewed; 468 AA.
AC A0A1H2WIF6;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE RecName: Full=Excinuclease cho {ECO:0000256|ARBA:ARBA00040756};
DE AltName: Full=Endonuclease cho {ECO:0000256|ARBA:ARBA00042732};
DE AltName: Full=UvrC homolog protein {ECO:0000256|ARBA:ARBA00042138};
GN ORFNames=SAMN05444411_102210 {ECO:0000313|EMBL:SDW80432.1};
OS Lutibacter oricola.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Lutibacter.
OX NCBI_TaxID=762486 {ECO:0000313|EMBL:SDW80432.1, ECO:0000313|Proteomes:UP000199595};
RN [1] {ECO:0000313|EMBL:SDW80432.1, ECO:0000313|Proteomes:UP000199595}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 24956 {ECO:0000313|EMBL:SDW80432.1,
RC ECO:0000313|Proteomes:UP000199595};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FNNJ01000002; SDW80432.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1H2WIF6; -.
DR STRING; 762486.SAMN05444411_102210; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000199595; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30562:SF10; EXCINUCLEASE CHO; 1.
DR PANTHER; PTHR30562; UVRC/OXIDOREDUCTASE; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000199595}.
FT DOMAIN 194..270
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
SQ SEQUENCE 468 AA; 53646 MW; A38AAD5217868E0A CRC64;
MYSIIDIETT GHSSKITEIS IFVFDGEKVI NEYTTLVNPE SNIPPFITNL TGINNAMVAN
APKFYEIAKK VNEITKDTVF VAHNVNFDYN IIHKEFKDLG FDFKRKKLCT VRLSRKLIPG
LKSYSLGSLC STQNIHIQDR HRAKGDAEAT TILFEKLLKL DKDQTVFNSF LNPKSKQATL
PPLLPKKVVD NLSTKEGVYY FKNNKGEIIY VGKANNIKQR VTSHFYDKAK KEVSMCLETA
NVTYTETGSE LLALLLESSE IKKIYPKFNR AQRRTSESIG LFTYVDRNGI KHIAFNKLKL
VKNPLMKFYN ATDCRQFIEK LCDEFELCPK YCHLQSNVSS CFHYQLKKCK GICSNKESVA
LYNIRVQQAV NSIQFETENF AIKEKGRTKN ENAYVLILNG IYKGFGYISA KKQLTTANDY
LKIIEPKKDN TDVKRILNAF LKKEETIIEP IKGAYYEPET FDLFSLQP
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