ID A0A1H3TLL5_9RHOB Unreviewed; 615 AA.
AC A0A1H3TLL5;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=PAS domain S-box-containing protein {ECO:0000313|EMBL:SDZ50239.1};
GN ORFNames=SAMN05444004_11778 {ECO:0000313|EMBL:SDZ50239.1};
OS Jannaschia faecimaris.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Jannaschia.
OX NCBI_TaxID=1244108 {ECO:0000313|EMBL:SDZ50239.1, ECO:0000313|Proteomes:UP000198914};
RN [1] {ECO:0000313|EMBL:SDZ50239.1, ECO:0000313|Proteomes:UP000198914}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 100420 {ECO:0000313|EMBL:SDZ50239.1,
RC ECO:0000313|Proteomes:UP000198914};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FNPX01000017; SDZ50239.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1H3TLL5; -.
DR STRING; 1244108.SAMN05444004_11778; -.
DR OrthoDB; 9805953at2; -.
DR Proteomes; UP000198914; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF117; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF13426; PAS_9; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 149..194
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 220..272
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 304..533
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT COILED 263..301
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 615 AA; 67410 MW; B4F2CD9E20296487 CRC64;
MISELESHTL VTPLPTVIVD AQTDRITSAN ALAAVFFDRA DLPGAPFSRL VAPGLSELAV
FAEEVAYRGT AWTRSLSVCR PDGSQASCEI KGRALTTEPL SLMLVFVDLT EMNHHARQAE
TDDLLRGGLL AWERAKTFFA DLERGNQLIL DAAGEGIYGI NAEGKTTFVN GAAQDMLGWT
SDDLIGRDIH AIIHHHHLNG DHYPVSDCPI YKTFRFEQVH RIEDEVFWRK DGQPIRVEYT
STPIYDHGVL AGAVVIFRDI TSRKEQEKKL QGAMAEIADL RDRLEQENAY LQEEIASERA
HHDIVGTSAA TARVIARLEV AARLATPVLL TGESGSGKSL VASALHKESD RRRRPLIEVK
CSAIAPDAME AELFGQIRGA FAGALRDKPG RLELAHGGIL HLDAVDALPL AQQAQMLDAL
ETRTVTRLGD TRPRRVDIAV IASTNRSLAV EVAEGRFRED LYFHLNVLTI NCPPLRERPE
DIAPLAAHLL KLSCRRLGKP VPIVTEGTIR RLTGYAWPGN VRELANVIER GAILSDQGKL
VVELPDGITP NPVAADVILT ETDLTQMMRS NIVRCLNETG GRISGADGAA KKLGIKPTTL
RSRIEKFGIL RGDWG
//
