ID A0A1H4C496_9GAMM Unreviewed; 560 AA.
AC A0A1H4C496;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=SAMN02745729_104177 {ECO:0000313|EMBL:SEA55199.1};
OS Marinobacterium iners DSM 11526.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae; Marinobacterium.
OX NCBI_TaxID=1122198 {ECO:0000313|EMBL:SEA55199.1, ECO:0000313|Proteomes:UP000242469};
RN [1] {ECO:0000313|Proteomes:UP000242469}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 11526 {ECO:0000313|Proteomes:UP000242469};
RA Varghese N., Submissions S.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
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DR EMBL; FNRJ01000004; SEA55199.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1H4C496; -.
DR STRING; 1122198.SAMN02745729_104177; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000242469; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05689; S1_RPS1_repeat_ec4; 1.
DR CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000242469};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:SEA55199.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 21..87
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 105..171
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 192..260
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 277..347
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 364..434
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 451..520
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 560 AA; 61542 MW; BEFBA669CCFA753E CRC64;
MSESFADLFE ESLQDIAMTP GTLVMGEVVD IDSDWVTVNA GLKSEAVIPR SQFLNDNNEL
EIQVGDSVKV ALEAVEDGFG ETRLSREKAK RAEAWEVLQK KFDAEETVKG YISGKVKGGF
TVSINNIQGF LPGSLVDVRP VRDVDHLEGK ELDFKLIKLD PKRNNIVVSR RAVLQEANSA
QREELLATLE EGQIAKGYVK NLTNYGAFID LGGVDGLLHI TDMAWKRISH PSEMLNPGDE
ISVKIIKFDK ETNRISLGLK QLSEDPWDDI KDRYPAGTKV AARVTNLTDY GCFASIEDGV
EGLVHVSEMS WTNKNIHPSK IVNIGDEVEV MILDVDEERR RISLGIKQCT INPWISFSEQ
HAAGDKVSGT IKTITDFGIF VGLDNDLDGL VHMSDISWEA DPETALRQFK KGDEVEAVIL
SIDAEKERIS LGVKQLESDP FAEYLAANDK GTIVTGTVKS VEPKAAVIEL AEGIEGTLKV
SEIAAERIDD ATTALKVGET VEAKITAVDR RNRVINLSIR AKDQAEEKAA ISAVRNQEVE
VPGPTTIGDL IKQQMANQNN
//
