ID A0A1H4DJF7_9GAMM Unreviewed; 948 AA.
AC A0A1H4DJF7;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=oxoglutarate dehydrogenase (succinyl-transferring) {ECO:0000256|ARBA:ARBA00012280};
DE EC=1.2.4.2 {ECO:0000256|ARBA:ARBA00012280};
GN ORFNames=SAMN05660964_02263 {ECO:0000313|EMBL:SEA72676.1};
OS Thiothrix caldifontis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC Thiotrichaceae; Thiothrix.
OX NCBI_TaxID=525918 {ECO:0000313|EMBL:SEA72676.1, ECO:0000313|Proteomes:UP000199397};
RN [1] {ECO:0000313|EMBL:SEA72676.1, ECO:0000313|Proteomes:UP000199397}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 21228 {ECO:0000313|EMBL:SEA72676.1,
RC ECO:0000313|Proteomes:UP000199397};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: E1 component of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex which catalyzes the decarboxylation of 2-oxoglutarate, the
CC first step in the conversion of 2-oxoglutarate to succinyl-CoA and
CC CO(2). {ECO:0000256|ARBA:ARBA00003906}.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
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DR EMBL; FNQP01000012; SEA72676.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1H4DJF7; -.
DR STRING; 525918.SAMN05660964_02263; -.
DR OrthoDB; 9759785at2; -.
DR Proteomes; UP000199397; Unassembled WGS sequence.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR CDD; cd02016; TPP_E1_OGDC_like; 1.
DR Gene3D; 3.40.50.12470; -; 1.
DR Gene3D; 3.40.50.970; -; 1.
DR Gene3D; 3.40.50.11610; Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain; 1.
DR Gene3D; 1.10.287.1150; TPP helical domain; 1.
DR InterPro; IPR032106; 2-oxogl_dehyd_N.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR031717; KGD_C.
DR InterPro; IPR042179; KGD_C_sf.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR NCBIfam; TIGR00239; 2oxo_dh_E1; 1.
DR PANTHER; PTHR23152:SF4; 2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1; 1.
DR PANTHER; PTHR23152; 2-OXOGLUTARATE DEHYDROGENASE; 1.
DR Pfam; PF16078; 2-oxogl_dehyd_N; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF16870; OxoGdeHyase_C; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE 4: Predicted;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000199397};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052}.
FT DOMAIN 603..796
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
SQ SEQUENCE 948 AA; 105700 MW; 475DE8E20775C796 CRC64;
MNKGEAQATA WNADTQLDGN SLLYLEEMYE RYLQEPASIP ASWQHYFDAL PAVNGHERDT
RHSLVKDYFR AYAAKPQAVA APVAGSVDME HERKQVKVLQ LINAYRFLGH FHAKTNPLDE
NTPAFVKELT LAYHSLSEAD LDTTFNTGSL VAPDQLTLRE IIAQLEATYC GSIGVQYMHT
TSTEQKRWVQ QRLESVRSTP TFSPAEKLEI LDRLTAAEGL ERYLHTNYVG QKRFSLEGGE
SLIPMLNTLI QHGGSLGAQE MVIGMAHRGR LNVLVNVLGK APALLFGEFE GKYANNGDRT
GDVKYHMGFA SDMMTPGGPL HVAMAFNPSH LEIVGPVVQG AVRARQDRWD DAGGDKIIPV
VLHGDAAFAG QGVNMEMLQM ADTRGYRTYG TIHIVINNQV GFTTSTAADA RSTYYCTDIA
KMVDSPVFHV NGDDPEAVVL ITQIAFDFRA KFDKDVVIDL VCYRRHGHNE ADEPSATQPV
MYRKIRALPT TRELYARRLT GEGLITAEDA QERVQRCRQQ LTSGAPTVPH LLEKGEVQNP
HPVKWKRFVD NAWDMPVDTT ISADAVKRLG TKLTEYPADF KLNSRVARIV ADRKKMAAGE
QLMDWGFCEN LAYASLIDEG YPIRLSGEDC GRGTFFHRHA VFHEQESGAT FVPLQHLSEA
QMPFVVIDSL LSEEAVLAFE YGYATTEANT LVIWEAQFGD FANCAQVVID QFISSGEQKW
GRLCGLVMLL PHGFEGQGPE HSSARLERYL QLCAQHNMQV CVPSTPAQAF HMLRRQMVRD
YRTPLIVMTP KSLLRHPLAV NSMEDLTERG FQNVIDEIDV LDPLKVTRLV MCSGKVYYDL
LEQRRKAGLD DVALVRIEQI YPFPEADMNV ILDRYPNIAV NVWCQEEPLN QGAWLSIQPA
LRLVLGGMAR LDVVSRPASA SPAVGSAKVH AAQQQELVNN ALGIRVES
//