ID A0A1H4FIU6_9GAMM Unreviewed; 240 AA.
AC A0A1H4FIU6;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=L,D-transpeptidase catalytic domain {ECO:0000313|EMBL:SEA96977.1};
GN ORFNames=SAMN02982996_03076 {ECO:0000313|EMBL:SEA96977.1};
OS Lonsdalea quercina.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Lonsdalea.
OX NCBI_TaxID=71657 {ECO:0000313|EMBL:SEA96977.1, ECO:0000313|Proteomes:UP000187280};
RN [1] {ECO:0000313|EMBL:SEA96977.1, ECO:0000313|Proteomes:UP000187280}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29281 {ECO:0000313|EMBL:SEA96977.1,
RC ECO:0000313|Proteomes:UP000187280};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
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DR EMBL; FNQS01000013; SEA96977.1; -; Genomic_DNA.
DR RefSeq; WP_026743247.1; NZ_FNQS01000013.1.
DR AlphaFoldDB; A0A1H4FIU6; -.
DR STRING; 71657.SAMN02982996_03076; -.
DR eggNOG; COG3034; Bacteria.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000187280; Unassembled WGS sequence.
DR GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR GO; GO:0016757; F:glycosyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR NCBIfam; NF040599; LdtF_DpaA_YafK; 1.
DR PANTHER; PTHR36699:SF1; L,D-TRANSPEPTIDASE YAFK-RELATED; 1.
DR PANTHER; PTHR36699; LD-TRANSPEPTIDASE; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000187280};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT SIGNAL 1..23
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 24..240
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5010561039"
FT DOMAIN 42..157
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 240 AA; 27570 MW; 5C3373E797DAF2C8 CRC64;
MQKIALSFAT LFFLPSVFVT SYASEVIPVT TSFKQQALGS PVYIQIFKEE RLLELYAKIG
TDYRLVQSYP ICKYSGGLGP KRVEGDMKSP EGFYQVDLHQ LKPDSRFHRA INVGFPNEYD
RAQGYSGRYL MIHGECVSVG CYAMTNQYID EIYTYVERAL LNGQAKVELA IYPFRMTDKN
LQRHRNSTYA NFWQQLQPGY AYFNQHHQPP AVAVFNGQYM VNQATPNKNP FSNYALTKVE
//
