ID A0A1H7ZM55_9FIRM Unreviewed; 305 AA.
AC A0A1H7ZM55;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU362028};
DE EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};
GN ORFNames=SAMN05216180_0711 {ECO:0000313|EMBL:SEM58527.1};
OS Hydrogenoanaerobacterium saccharovorans.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Hydrogenoanaerobacterium.
OX NCBI_TaxID=474960 {ECO:0000313|EMBL:SEM58527.1, ECO:0000313|Proteomes:UP000199158};
RN [1] {ECO:0000313|EMBL:SEM58527.1, ECO:0000313|Proteomes:UP000199158}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CGMCC 1.5070 {ECO:0000313|EMBL:SEM58527.1,
RC ECO:0000313|Proteomes:UP000199158};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Responsible for synthesis of pseudouridine from uracil.
CC {ECO:0000256|RuleBase:RU362028}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a uridine in RNA = a pseudouridine in RNA;
CC Xref=Rhea:RHEA:48348, Rhea:RHEA-COMP:12068, Rhea:RHEA-COMP:12069,
CC ChEBI:CHEBI:65314, ChEBI:CHEBI:65315;
CC Evidence={ECO:0000256|RuleBase:RU362028};
CC -!- SIMILARITY: Belongs to the pseudouridine synthase RluA family.
CC {ECO:0000256|ARBA:ARBA00010876, ECO:0000256|RuleBase:RU362028}.
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DR EMBL; FOCG01000001; SEM58527.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1H7ZM55; -.
DR STRING; 474960.SAMN05216180_0711; -.
DR OrthoDB; 9807829at2; -.
DR Proteomes; UP000199158; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0120159; F:rRNA pseudouridine synthase activity; IEA:UniProt.
DR GO; GO:0000455; P:enzyme-directed rRNA pseudouridine synthesis; IEA:UniProt.
DR CDD; cd02869; PseudoU_synth_RluA_like; 1.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.30.2350.10; Pseudouridine synthase; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR006224; PsdUridine_synth_RluA-like_CS.
DR InterPro; IPR006225; PsdUridine_synth_RluC/D.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR NCBIfam; TIGR00005; rluA_subfam; 1.
DR PANTHER; PTHR21600; MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE; 1.
DR PANTHER; PTHR21600:SF44; PSEUDOU_SYNTH_2 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR PROSITE; PS01129; PSI_RLU; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Isomerase {ECO:0000256|RuleBase:RU362028};
KW Reference proteome {ECO:0000313|Proteomes:UP000199158};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT DOMAIN 16..80
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
FT ACT_SITE 140
FT /evidence="ECO:0000256|PIRSR:PIRSR606225-1"
SQ SEQUENCE 305 AA; 34265 MW; 8004F26BAE29C96D CRC64;
MPNKLEFSIL PDHNSVRIDK WLAENVPDIT RTTAQRLCDE NLVLVCGKVV NKNYKLRTGD
VLDVTIPDPH ELNVVPQDIP LEVVYEDRDL LVVNKSKGMV VHPAAGNYDG TMVNALLYRC
KGQLSGINGV IRPGIVHRID KNTSGLLIVA KNDKSHTALA AQINAHTFTR VYEAMVYGNV
KQDKGTVDAP IGRHPTFRKK MCVIEKNSRS AITHYEVIAR YNGFTHIRCR LETGRTHQIR
VHMAYIGHPV AGDDVYGPKK VIKSLEGQCL HAKVIGFIHP TTGEYMEFES ELPLYFKSFL
NTLKQ
//
