ID A0A1H8J2C4_9RHOB Unreviewed; 400 AA.
AC A0A1H8J2C4;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Integrase {ECO:0000313|EMBL:SEN74882.1};
GN ORFNames=SAMN04489859_101545 {ECO:0000313|EMBL:SEN74882.1};
OS Paracoccus alcaliphilus.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Paracoccus.
OX NCBI_TaxID=34002 {ECO:0000313|EMBL:SEN74882.1, ECO:0000313|Proteomes:UP000199054};
RN [1] {ECO:0000313|EMBL:SEN74882.1, ECO:0000313|Proteomes:UP000199054}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8512 {ECO:0000313|EMBL:SEN74882.1,
RC ECO:0000313|Proteomes:UP000199054};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
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DR EMBL; FODE01000015; SEN74882.1; -; Genomic_DNA.
DR RefSeq; WP_000954590.1; NZ_FODE01000015.1.
DR AlphaFoldDB; A0A1H8J2C4; -.
DR SMR; A0A1H8J2C4; -.
DR STRING; 34002.SAMN04489859_101545; -.
DR OrthoDB; 9795573at2; -.
DR Proteomes; UP000199054; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR CDD; cd00801; INT_P4_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 3.30.160.390; Integrase, DNA-binding domain; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR038488; Integrase_DNA-bd_sf.
DR InterPro; IPR025166; Integrase_DNA_bind_dom.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR Pfam; PF13356; Arm-DNA-bind_3; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000199054};
KW Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT DOMAIN 97..176
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 199..383
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 400 AA; 45330 MW; 0EC6ADF2527FEBD5 CRC64;
MLTDTKLRNL KPRDKLYKVN DREGLYVAVT PAGSISFRYN YSINGRQETI TFGRYGVGGI
TLAEARELLG DAKKMVAAGK SPAKEKARDK ARVKDAETFG AWAEKWLRGY QMADSTRDMR
RSVYERELKP KFSNQKLVEI THEDLRALAD AIVERGAPAT AVHVREIVLQ VFRWAIERGQ
KVENPAELVR PTSIARFEPR DRALTPEEIG LMYQYMERVG TSPTNRAAAK LLLLTMVRKS
ELTNATWSEI NFSEALWTIP KERMKRRNPH LVFLSQQALD IFIAMKTFAG GSDFVLPSRY
DSDAPMSAAT LNQVLTLTYK AAQKDGKSLT KFGPHDLRRT ASTLLHEAGY NTDWIEKCLA
HEQKGVRAVY NKAEYREQRA AMLQDWADMI DEWTSGGSKG
//
