ID A0A1H8JYQ5_9RHOB Unreviewed; 421 AA.
AC A0A1H8JYQ5;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Site-specific recombinase XerD {ECO:0000313|EMBL:SEN85358.1};
GN ORFNames=SAMN04488003_1455 {ECO:0000313|EMBL:SEN85358.1};
OS Loktanella fryxellensis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Loktanella.
OX NCBI_TaxID=245187 {ECO:0000313|EMBL:SEN85358.1, ECO:0000313|Proteomes:UP000199585};
RN [1] {ECO:0000313|EMBL:SEN85358.1, ECO:0000313|Proteomes:UP000199585}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16213 {ECO:0000313|EMBL:SEN85358.1,
RC ECO:0000313|Proteomes:UP000199585};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
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DR EMBL; FOCI01000045; SEN85358.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1H8JYQ5; -.
DR STRING; 245187.SAMN04488003_1455; -.
DR OrthoDB; 6388170at2; -.
DR Proteomes; UP000199585; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd00796; INT_Rci_Hp1_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 3.30.160.390; Integrase, DNA-binding domain; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR038488; Integrase_DNA-bd_sf.
DR InterPro; IPR025166; Integrase_DNA_bind_dom.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR Pfam; PF13356; Arm-DNA-bind_3; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000199585}.
FT DOMAIN 220..396
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
FT REGION 157..181
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 157..173
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 421 AA; 47800 MW; 6003A7C3738819F6 CRC64;
MPERIKLTEK VLREAEPVVG RDYQIFDTEV RGFAACIYRG GGRAFTLDYR HAGRQRRMTF
GRWPEWSVSA ARERAKEIRR EIDAGADPLA QRGALREAPR VDDLIERYCA QHLPKLAERN
ASDQKSALAK MVAPVWGRKL VTEITSTDVD KLLNKVAEGR PRPHKEKPNN RAKKLQPAKP
TPVRANRIGE VLRKMFTLAV EWGWCEDNPA QRFHRRIETA RERFLSKDEI TSLAAALDAA
EDRRAADIIR MCMLTGARLG EVRQARFEQF NLEHMSWSKP PAMTKQRRVH RVPISDETAT
IVRQRQLSVP RGTPWLFPSD TPGQPVQEVR RFWAQIQKEC GLQEVHIHDL RHTFASLLVS
GGASLEMIGK LLGHSQMQTT LRYAHLMDSP LRAGVDAVAS AFRPKPGLVH DADDQGGRKT
A
//