ID   A0A1H8Y4F8_9FIRM        Unreviewed;       397 AA.
AC   A0A1H8Y4F8;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   27-MAR-2024, entry version 18.
DE   SubName: Full=Site-specific recombinase XerD {ECO:0000313|EMBL:SEP46871.1};
GN   ORFNames=SAMN04490178_14124 {ECO:0000313|EMBL:SEP46871.1};
OS   Propionispora vibrioides.
OC   Bacteria; Bacillota; Negativicutes; Selenomonadales; Sporomusaceae;
OC   Propionispora.
OX   NCBI_TaxID=112903 {ECO:0000313|EMBL:SEP46871.1, ECO:0000313|Proteomes:UP000198847};
RN   [1] {ECO:0000313|EMBL:SEP46871.1, ECO:0000313|Proteomes:UP000198847}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 13305 {ECO:0000313|EMBL:SEP46871.1,
RC   ECO:0000313|Proteomes:UP000198847};
RA   de Groot N.N.;
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC       {ECO:0000256|ARBA:ARBA00008857}.
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DR   EMBL; FODY01000041; SEP46871.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1H8Y4F8; -.
DR   STRING; 112903.SAMN04490178_14124; -.
DR   OrthoDB; 9803188at2; -.
DR   Proteomes; UP000198847; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   CDD; cd01189; INT_ICEBs1_C_like; 1.
DR   Gene3D; 1.10.150.130; -; 1.
DR   Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR   InterPro; IPR044068; CB.
DR   InterPro; IPR011010; DNA_brk_join_enz.
DR   InterPro; IPR013762; Integrase-like_cat_sf.
DR   InterPro; IPR002104; Integrase_catalytic.
DR   InterPro; IPR010998; Integrase_recombinase_N.
DR   InterPro; IPR004107; Integrase_SAM-like_N.
DR   PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR   PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR   Pfam; PF14659; Phage_int_SAM_3; 1.
DR   Pfam; PF00589; Phage_integrase; 1.
DR   SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR   PROSITE; PS51900; CB; 1.
DR   PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE   3: Inferred from homology;
KW   DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW   ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000198847};
KW   Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT   DOMAIN          77..166
FT                   /note="Core-binding (CB)"
FT                   /evidence="ECO:0000259|PROSITE:PS51900"
FT   DOMAIN          187..388
FT                   /note="Tyr recombinase"
FT                   /evidence="ECO:0000259|PROSITE:PS51898"
SQ   SEQUENCE   397 AA;  45276 MW;  0B023DB836680F84 CRC64;
     MAKERSNGEC TVFERKDRPG VWRGQAVWIN AATGQRIVKS FDISKGTELQ KKREALKKAQ
     KWLDQVQNGL MPDADKVTVG DWIDRWLQDY VKPNVRIKSF DKYEGCLCDY VKPKFGNMLL
     TKVKEPDLQR FFIWLLSDGG RKGQGLSTST VKATRRYLSM CFDQAIKSGL LLKNVVKDTR
     PIKLVKKDIM PLDKEQAAAL TNIAKTTGEM QHMAILLALS TGMRLGELFG LKWDCVDLNK
     GVIQVVRALV TSKSGQLFQE PKTAASRRKI PLPADVTKEL RRYKKWQDWQ RHLMGDKWEE
     NDLVLANNYG RVVDTSNFTS RYFKTMLVQA GVDRSVKFHD LRHTHATLLL LQGVNVKVVA
     ERLGHTSIKM TLDTYSHVLP DMQEAAVKAL EGMFCIR
//