ID A0A1H9LHD8_9GAMM Unreviewed; 567 AA.
AC A0A1H9LHD8;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Regulatory protein, Fis family {ECO:0000313|EMBL:SER10836.1};
GN ORFNames=SAMN03080615_03954 {ECO:0000313|EMBL:SER10836.1};
OS Amphritea atlantica.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae; Amphritea.
OX NCBI_TaxID=355243 {ECO:0000313|EMBL:SER10836.1, ECO:0000313|Proteomes:UP000198749};
RN [1] {ECO:0000313|Proteomes:UP000198749}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18887 {ECO:0000313|Proteomes:UP000198749};
RA Varghese N., Submissions S.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FOGB01000017; SER10836.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1H9LHD8; -.
DR STRING; 355243.SAMN03080615_03954; -.
DR OrthoDB; 9804019at2; -.
DR Proteomes; UP000198749; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.1380.20; Trafficking protein particle complex subunit 3; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR024096; NO_sig/Golgi_transp_ligand-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR InterPro; IPR004096; V4R.
DR InterPro; IPR010523; XylR_N.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF95; TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR Pfam; PF02830; V4R; 1.
DR Pfam; PF06505; XylR_N; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00989; V4R; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF111126; Ligand-binding domain in the NO signalling and Golgi transport; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 230..459
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 567 AA; 63007 MW; B55B6451F1F1E0C6 CRC64;
MHKDESIETP FLLENEILDK TAEGKIYLLG QRMLLLHGYT LASLRREFIE RIGLKTTREI
FTRLGYQQGT QDALQLKKQG ITALDKLFTF GPKIRELEGF VLNRAVKKMH YDEDTGRFWG
DYIWESSWES KAHLEHLGVS GSPACWLMTG YACGYTTTVM GRPIVWKETE CVGMGHKHCR
VVATPLEEAD DIDEHLGFMQ IETFISRPKS SNCIPLTEPA AAPDTVLPDM VGSSQQFNAV
ASKLKKVAAT HSSVLLIGES GVGKERFAQA LHSISQRATG PFISVNCAAI PADLVEAELF
GVQKGAFTGA VESRPGRFER ADGGTLFLDE ISSLPLAAQG KLLRALQEKE VERVGGTEII
RVNVRIVAAA NTNLTEDVAN GHFRADLYYR INIFPIKIPP LRQRTDDIAL LINLFINRFA
AEMQKPVTGI SRQAFNQLLN HSWPGNVREL ENVCERAVIL AEENSNIDIE HLLIDEDYTL
SANNRVLTSA DTRNSSTTDP GEQTNITGAA IEEILSGISS FDEIEHLILQ HALSRNGGNI
SAAARYLNLR RGQFEYRLKK HQSGDTD
//
