ID A0A1H9YZK2_9BACT Unreviewed; 702 AA.
AC A0A1H9YZK2;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=DNA-binding protein Fis {ECO:0000313|EMBL:SES74639.1};
GN ORFNames=SAMN04487998_0151 {ECO:0000313|EMBL:SES74639.1};
OS Hymenobacter actinosclerus.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae;
OC Hymenobacter.
OX NCBI_TaxID=82805 {ECO:0000313|EMBL:SES74639.1, ECO:0000313|Proteomes:UP000198697};
RN [1] {ECO:0000313|Proteomes:UP000198697}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15310 {ECO:0000313|Proteomes:UP000198697};
RA Varghese N., Submissions S.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FOHS01000001; SES74639.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1H9YZK2; -.
DR STRING; 82805.SAMN04487998_0151; -.
DR OrthoDB; 9782110at2; -.
DR Proteomes; UP000198697; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF121; PTS-DEPENDENT DIHYDROXYACETONE KINASE OPERON REGULATORY PROTEIN-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00065; GAF; 2.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:SES74639.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000198697};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 385..614
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 702 AA; 78969 MW; 2CCC483DA9DF54CA CRC64;
MPDQDDSLLL RLNEAIATTR NKEDLFRSVT EKLRLIFPFD AITIITLDAE HQYRRVFLRD
YLGDVLLPTG PTAARPARSS IENTPIERFI RSPRLQQFEL AALLRDYPDF QPFQGLFEAD
MRYLTAVPLR TGGRLIGLLS MVARRRPEFS EMDTDLLEKI GSLVAVAVTN TLAFEDIAHR
EQEKTMQLAL SNALLHIKER EELFRTIAVE INWVVPCDYF GLRVREADSA VRTLVEFRKQ
PDGSFAPPEE RRYDGLPDAA QAQQALAEVF VRPGVYGGAA FQELARRYTL LAYIEANYGT
RSLLCTPLDA ANESPTALIL ASGEPQAFTE EHLELMQTLL PQIRLALQNV LAFEQIDALR
AQLERERTYL IDEINTAAAA RLDDFVGGSA VMQQVYTRLA QVAPTDTTVL ITGETGTGKE
LVARALHQLS PRRERALIKV NCAALPAQLI ESELFGHEKG AFTGAVERRI GKFELADRGT
IFLDEVGELP LDLQAKLLRV LQEKEFERLG GRRVIATDVR VVAATNRVLE QEVAAGRFRA
DLYYRLNVFE VRLPALRERP EDVEPLLRHF LERFTRQMGK PVRRLRERDL RALRQYSWPG
NVRELEHVVE QAVIVSQGQF LEFQGFAAGP AAPATPATPT EAGGPLKTLK VQERDHILAA
LHRTGGRVSG PQGAAVLLDI NPKTLEARMK KLGIRREHQV VE
//
