ID A0A1I1NN37_9FLAO Unreviewed; 928 AA.
AC A0A1I1NN37;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=DNA-binding transcriptional regulator, CsgD family {ECO:0000313|EMBL:SFC98947.1};
GN ORFNames=SAMN04487987_102431 {ECO:0000313|EMBL:SFC98947.1};
OS Algibacter pectinivorans.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Algibacter.
OX NCBI_TaxID=870482 {ECO:0000313|EMBL:SFC98947.1, ECO:0000313|Proteomes:UP000199439};
RN [1] {ECO:0000313|Proteomes:UP000199439}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 25730 {ECO:0000313|Proteomes:UP000199439};
RA Varghese N., Submissions S.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FOMI01000002; SFC98947.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I1NN37; -.
DR STRING; 870482.SAMN04487987_102431; -.
DR OrthoDB; 1090267at2; -.
DR Proteomes; UP000199439; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR011123; Y_Y_Y.
DR Pfam; PF07495; Y_Y_Y; 1.
DR SMART; SM00421; HTH_LUXR; 1.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:SFC98947.1};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000199439};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 737..762
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 868..925
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|SMART:SM00421"
SQ SEQUENCE 928 AA; 107275 MW; 0BE208B308E5684A CRC64;
MKIILKIAFT FFIVLLVNAK LIGQELPPIQ KFSPVDYSAD SQNWMVSQGA NNFIYAANNK
GLLEYNGNNW TVYPSPNNTI VRSVNAIKER VYTGCYSDFG FWQKNNFGVL EYTSLVSKLD
SNVLIDEQIW DIIEYKEWVT FQGRKHIYFY NTTTEEFKII TSKNLIYKIF KVDNRIYYHV
DNEGLYTIED GKPKLLVNDA ITLNDRVINV FENNKNLFLL TRKSGFYKIE GHTLISWRIP
SLNTLKNLSV FSAIQLSDKS YMLGTISKGI LHITKDGQID YIINQKKGLS NNTVLSLFED
SNHNVWAGLD NGLDCINVTS PIKTFIDYDG VLGTVYASKV FKDYLYLGTN QGLFYRKLGA
VNDGFKFIKG TAGQVWSLYN YNDDHLLCGH HLGGFLVNKD KVEKISDYLG VWNFKNVPNQ
DNLLLQGNYD GIYVLEKTNN NWTLRNKIKG FNNSSRYFEF TNSNQIWVNH EYKGVYKLTL
NNSLTQVIKV TKEQGLPKGK NSSLITYRDQ MLYMSNSGVF KLNDSLQTFK KDSTLSKLAL
SNHYISGKMV VDLNKRLWLF SKENLSFINN DNLTNNITIT NLPLPSKFRR GALGFENIEN
ITHNTYILGT ANGYLKLNLD NVTYSDHYAV HLNSVLNTDI NQDLTTKISL QDSGDFNYKY
GILTFNYSVP EYEKYVDVEY QFKLNGNINK WSEWSNKAEI SFENLSHGDY HFQVRAKVGN
KLSSNIASYK FTINKPWYIS NLAWCIYLLL LITIAILTHS IYKNYYNKML KNKELKNKQI
IMQMKNEKLN QDIENKNREL AISTMSIIKK NRVLNKIKKE LKKSKDANNA EAIKLVESNL
NDSKDWSFFE QAFNNADKDF LEKIKQVHPD LTPNDLRFCA YLRLNLSSKE MAPLLNISVK
SVETKRYRLR KKLGLEHDNG LVNYILKF
//