ID A0A1I1QKB3_9RHOB Unreviewed; 221 AA.
AC A0A1I1QKB3;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=L,D-transpeptidase catalytic domain {ECO:0000313|EMBL:SFD22432.1};
GN ORFNames=SAMN04488094_12143 {ECO:0000313|EMBL:SFD22432.1};
OS Tropicimonas isoalkanivorans.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Tropicimonas.
OX NCBI_TaxID=441112 {ECO:0000313|EMBL:SFD22432.1, ECO:0000313|Proteomes:UP000198728};
RN [1] {ECO:0000313|EMBL:SFD22432.1, ECO:0000313|Proteomes:UP000198728}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19548 {ECO:0000313|EMBL:SFD22432.1,
RC ECO:0000313|Proteomes:UP000198728};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
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DR EMBL; FOLG01000021; SFD22432.1; -; Genomic_DNA.
DR RefSeq; WP_007803448.1; NZ_FOLG01000021.1.
DR AlphaFoldDB; A0A1I1QKB3; -.
DR STRING; 441112.SAMN04488094_12143; -.
DR OrthoDB; 9795305at2; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000198728; Unassembled WGS sequence.
DR GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30582:SF24; L,D-TRANSPEPTIDASE ERFK_SRFK-RELATED; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000198728};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT SIGNAL 1..25
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 26..221
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5011686934"
FT DOMAIN 75..207
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 221 AA; 24545 MW; FB5B243AF0CF7D4D CRC64;
MLTRRHFIQT TTALFSASIS SPLLADTWPT DAQKAAWDAQ VTPPGYDPAT SNPWGLHPRF
LPQRVLAKDG LVPGDIHVDA VARYLYHIEE GGTAMRYGVA IARGKLYEPG TYTIKRKVRW
PHWQPTQNMI DRDPELYADI ADGMEPGPEN ALGSRALYLF VGDRDTYLRI HGTPYPRSIG
GRASSGCVRM VMAHINDLYP NVEIGSTAFL YSAEDSVTPR S
//