ID A0A1I1SZP3_9GAMM Unreviewed; 503 AA.
AC A0A1I1SZP3;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:SFD51925.1};
GN ORFNames=SAMN02745724_04749 {ECO:0000313|EMBL:SFD51925.1};
OS Pseudoalteromonas denitrificans DSM 6059.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Pseudoalteromonadaceae; Pseudoalteromonas.
OX NCBI_TaxID=1123010 {ECO:0000313|EMBL:SFD51925.1, ECO:0000313|Proteomes:UP000198862};
RN [1] {ECO:0000313|EMBL:SFD51925.1, ECO:0000313|Proteomes:UP000198862}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 6059 {ECO:0000313|EMBL:SFD51925.1,
RC ECO:0000313|Proteomes:UP000198862};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FOLO01000064; SFD51925.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I1SZP3; -.
DR STRING; 1123010.SAMN02745724_04749; -.
DR Proteomes; UP000198862; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR32071:SF122; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YPLP-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF12833; HTH_18; 1.
DR Pfam; PF14532; Sigma54_activ_2; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000198862};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 129..342
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT DOMAIN 401..500
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 503 AA; 57760 MW; 5F1DD13D9C1F6C3F CRC64;
MELYPNNNLF TKKYPSNIFA QEQQFKECLN SALEYDNIKH ASIHLFGLDE QAKSDLRLAV
QTPFVKSDTS YPILYHRKQI GMLNIPPCPA KERNEKQSVS DITKKIALLV KRHQATELSK
HYLGQNLELI GHSKEILELE SFIEKASNTN YAVVIEGEFG CEKLAVASAI HYNSSNKHNP
FIEIHCATAN FDEFKQNLFQ SINEAVKGTI FLSEVDLLGT SQQNLLVELL SANTISEEFD
NTIKQKLKNI RLIASSSSAL ESKIKDQSFS KQLYCELNFL TVNFPALRDR KDDIPHILKK
LVNKHKVYEE QGFSTEVLQK LSHYDWPENF IQLEHITARL LTLSCSNPIN LNDLNLYAPE
VLEAKPAAKL ENNKLNINSQ LIDNMLNNKW EGFNHLHIKL QKAVKYIAEN FTESISLSDV
SEQAFVSPSH ISYLFKLHLK KSFKQILAEL RIEKAKQLIK LTPHIRITDV SLEVGFGDLS
HFEKIFKRYT QLTPREFKKQ QVN
//
