ID A0A1I2E5H4_9BACT Unreviewed; 136 AA.
AC A0A1I2E5H4;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 13.
DE SubName: Full=tRNA(fMet)-specific endonuclease VapC {ECO:0000313|EMBL:SFE87876.1};
GN ORFNames=SAMN05216167_12124 {ECO:0000313|EMBL:SFE87876.1};
OS Spirosoma endophyticum.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.
OX NCBI_TaxID=662367 {ECO:0000313|EMBL:SFE87876.1, ECO:0000313|Proteomes:UP000198598};
RN [1] {ECO:0000313|EMBL:SFE87876.1, ECO:0000313|Proteomes:UP000198598}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 26130 {ECO:0000313|EMBL:SFE87876.1,
RC ECO:0000313|Proteomes:UP000198598};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- SIMILARITY: Belongs to the PINc/VapC protein family.
CC {ECO:0000256|ARBA:ARBA00038093}.
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DR EMBL; FOLQ01000021; SFE87876.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I2E5H4; -.
DR STRING; 662367.SAMN05216167_12124; -.
DR OrthoDB; 9796690at2; -.
DR Proteomes; UP000198598; Unassembled WGS sequence.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR InterPro; IPR002716; PIN_dom.
DR PANTHER; PTHR33653; RIBONUCLEASE VAPC2; 1.
DR PANTHER; PTHR33653:SF1; RIBONUCLEASE VAPC2; 1.
DR Pfam; PF01850; PIN; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 3: Inferred from homology;
KW Endonuclease {ECO:0000313|EMBL:SFE87876.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000313|EMBL:SFE87876.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000198598};
KW Toxin-antitoxin system {ECO:0000256|ARBA:ARBA00022649}.
FT DOMAIN 4..124
FT /note="PIN"
FT /evidence="ECO:0000259|Pfam:PF01850"
SQ SEQUENCE 136 AA; 15730 MW; B55AE8D36B247885 CRC64;
MNQYLLDTNI CIHFIKGAYD LGSKIQKVGF QSCYISEITI AELLYGVENS SLERRSINLQ
RVINLRTSFA ERVIPISQSL EEYAKQKAQL RKIGRRVEDF DIFIGSISII KNLILVTRNT
KDFINMNGVR LENWID
//