ID A0A1I3F9D7_9RHOB Unreviewed; 413 AA.
AC A0A1I3F9D7;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=Serine hydroxymethyltransferase {ECO:0000313|EMBL:SFI07808.1};
DE Flags: Fragment;
GN ORFNames=SAMN04488021_1651 {ECO:0000313|EMBL:SFI07808.1};
OS Paracoccus aminovorans.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Paracoccus.
OX NCBI_TaxID=34004 {ECO:0000313|EMBL:SFI07808.1, ECO:0000313|Proteomes:UP000183635};
RN [1] {ECO:0000313|EMBL:SFI07808.1, ECO:0000313|Proteomes:UP000183635}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8537 {ECO:0000313|EMBL:SFI07808.1,
RC ECO:0000313|Proteomes:UP000183635};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933,
CC ECO:0000256|PIRSR:PIRSR000412-50};
CC -!- SIMILARITY: Belongs to the SHMT family.
CC {ECO:0000256|ARBA:ARBA00006376}.
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DR EMBL; FOPU01000065; SFI07808.1; -; Genomic_DNA.
DR RefSeq; WP_074971139.1; NZ_FOPU01000065.1.
DR AlphaFoldDB; A0A1I3F9D7; -.
DR STRING; 34004.SAMN04488021_1651; -.
DR OrthoDB; 9803846at2; -.
DR Proteomes; UP000183635; Unassembled WGS sequence.
DR GO; GO:0004372; F:glycine hydroxymethyltransferase activity; IEA:InterPro.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0019264; P:glycine biosynthetic process from serine; IEA:InterPro.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0035999; P:tetrahydrofolate interconversion; IEA:InterPro.
DR CDD; cd00378; SHMT; 1.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR HAMAP; MF_00051; SHMT; 1.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR InterPro; IPR001085; Ser_HO-MeTrfase.
DR InterPro; IPR019798; Ser_HO-MeTrfase_PLP_BS.
DR InterPro; IPR039429; SHMT-like_dom.
DR PANTHER; PTHR11680; SERINE HYDROXYMETHYLTRANSFERASE; 1.
DR PANTHER; PTHR11680:SF28; SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL; 1.
DR Pfam; PF00464; SHMT; 1.
DR PIRSF; PIRSF000412; SHMT; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR PROSITE; PS00096; SHMT; 1.
PE 3: Inferred from homology;
KW Methyltransferase {ECO:0000313|EMBL:SFI07808.1};
KW One-carbon metabolism {ECO:0000256|ARBA:ARBA00022563};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898,
KW ECO:0000256|PIRSR:PIRSR000412-50};
KW Reference proteome {ECO:0000313|Proteomes:UP000183635};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000313|EMBL:SFI07808.1}.
FT DOMAIN 15..391
FT /note="Serine hydroxymethyltransferase-like"
FT /evidence="ECO:0000259|Pfam:PF00464"
FT MOD_RES 236
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR000412-50"
FT NON_TER 413
FT /evidence="ECO:0000313|EMBL:SFI07808.1"
SQ SEQUENCE 413 AA; 44348 MW; 418DBF046EDEC83B CRC64;
MNEQNRTGFF TEALDSRDPD IFGAIRQELG RQREEIELIA SENIVSKAVL EAQGSVLTNK
YAEGYPGKRY YGGCQYVDIV EDLAIERAKE LFDCGFANVQ PNSGSQMNQA VFLALLQPGD
TFMGLDLNSG GHLTHGSPVN MSGKWFNVVS YGVRQQDQLL DMEDVRKKAH EHKPKLIVAG
GTAYSRIWDW AEFRKIADEV GAYLMVDMAH IAGLVAGGQH PSPLPHAHVV TTTTHKSLRG
PRGGMVLTND EAIAKKINAA VFPGLQGGPL MHVIAAKAVA FGEALRPGFK DYAAQVVKNA
QAMADELMKG GIDIVSGGTD NHLCLADLRP KGVTGKATEA ALGRAHITCN KNGVPFDPEK
PFVTSGIRLG APAGTTRGFG EAEFRQIARW IVEVVDGLAA NGEDGNAAVE AKV
//