ID   A0A1I3ICU1_9SPHI        Unreviewed;       559 AA.
AC   A0A1I3ICU1;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   27-MAR-2024, entry version 20.
DE   SubName: Full=DNA polymerase (Family 10) {ECO:0000313|EMBL:SFI45700.1};
GN   ORFNames=SAMN05444682_10434 {ECO:0000313|EMBL:SFI45700.1};
OS   Parapedobacter indicus.
OC   Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC   Sphingobacteriaceae; Parapedobacter.
OX   NCBI_TaxID=1477437 {ECO:0000313|EMBL:SFI45700.1, ECO:0000313|Proteomes:UP000198670};
RN   [1] {ECO:0000313|EMBL:SFI45700.1, ECO:0000313|Proteomes:UP000198670}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RK1 {ECO:0000313|EMBL:SFI45700.1,
RC   ECO:0000313|Proteomes:UP000198670};
RA   de Groot N.N.;
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|ARBA:ARBA00001946};
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DR   EMBL; FOQO01000004; SFI45700.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1I3ICU1; -.
DR   STRING; 1477437.SAMN05444682_10434; -.
DR   OrthoDB; 9808747at2; -.
DR   Proteomes; UP000198670; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd07436; PHP_PolX; 1.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 1.10.150.110; DNA polymerase beta, N-terminal domain-like; 1.
DR   Gene3D; 3.30.210.10; DNA polymerase, thumb domain; 1.
DR   Gene3D; 3.20.20.140; Metal-dependent hydrolases; 1.
DR   InterPro; IPR002054; DNA-dir_DNA_pol_X.
DR   InterPro; IPR010996; DNA_pol_b-like_N.
DR   InterPro; IPR027421; DNA_pol_lamdba_lyase_dom_sf.
DR   InterPro; IPR037160; DNA_Pol_thumb_sf.
DR   InterPro; IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
DR   InterPro; IPR043519; NT_sf.
DR   InterPro; IPR003141; Pol/His_phosphatase_N.
DR   InterPro; IPR016195; Pol/histidinol_Pase-like.
DR   InterPro; IPR022311; PolX-like.
DR   InterPro; IPR047967; PolX_PHP.
DR   PANTHER; PTHR36928; PHOSPHATASE YCDX-RELATED; 1.
DR   PANTHER; PTHR36928:SF1; PHOSPHATASE YCDX-RELATED; 1.
DR   Pfam; PF14520; HHH_5; 1.
DR   Pfam; PF14716; HHH_8; 1.
DR   PIRSF; PIRSF005047; UCP005047_YshC; 1.
DR   SMART; SM00278; HhH1; 3.
DR   SMART; SM00481; POLIIIAc; 1.
DR   SMART; SM00483; POLXc; 1.
DR   SUPFAM; SSF47802; DNA polymerase beta, N-terminal domain-like; 1.
DR   SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR   SUPFAM; SSF89550; PHP domain-like; 1.
PE   4: Predicted;
KW   DNA synthesis {ECO:0000256|ARBA:ARBA00022634};
KW   Reference proteome {ECO:0000313|Proteomes:UP000198670}.
FT   DOMAIN          1..299
FT                   /note="DNA-directed DNA polymerase X"
FT                   /evidence="ECO:0000259|SMART:SM00483"
FT   DOMAIN          50..69
FT                   /note="Helix-hairpin-helix DNA-binding motif class 1"
FT                   /evidence="ECO:0000259|SMART:SM00278"
FT   DOMAIN          90..109
FT                   /note="Helix-hairpin-helix DNA-binding motif class 1"
FT                   /evidence="ECO:0000259|SMART:SM00278"
FT   DOMAIN          125..144
FT                   /note="Helix-hairpin-helix DNA-binding motif class 1"
FT                   /evidence="ECO:0000259|SMART:SM00278"
FT   DOMAIN          323..403
FT                   /note="Polymerase/histidinol phosphatase N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00481"
SQ   SEQUENCE   559 AA;  62818 MW;  E389C0205C3A5049 CRC64;
     MDNKTIAKTI RRYAQLMELH GENAFRTKAI AAAAFKLDKL PFRITPESLE KLSEVPGVGK
     STADKISALL ATGSFPELER LLTATPAGIR EMLTIKGLGP KKIQVIWREL GIETVGELFY
     ACNENRLIEA KGFGFKTQEE IKKAIEFAIA NQGWFLYANV EKLADEIMFS LQNLLPNDRK
     ISYTGDFRRK CEVLQSVDLL IEASLHELTA ALVTLTGLSI QSPTNSQPLE ARTDTGILFR
     FIPTDPRSFY RQLVISTGSD EHLRLLEDRL TESQLPEFDS EEAIYRSLKL AYIEPELREG
     TNELALAETG TLPTLVNYTD LRGALHNHST YSDGVNTLEE MALYCRDELR LEYLGISDHS
     KTAIYAKGLT IERVQEQWAE IDALNARLAP FYIFKGIESD ILSDGSLDYP DEVLAGFDFV
     VASIHANLRM DIEKATARLL RAIENPYTTI LGHPTGRLLL SRSGYPIDYA RVIDACAANG
     VAIEINANPL RLDLDWRWHR YAVEKGILLS INPDAHRNSG FQDMQYGVHV ARKGGLTAGN
     CLNTFPLERI KEYFHRQRS
//