ID A0A1I3RUF8_9FLAO Unreviewed; 433 AA.
AC A0A1I3RUF8;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:SFJ49690.1};
GN ORFNames=SAMN05443431_108152 {ECO:0000313|EMBL:SFJ49690.1};
OS Olleya namhaensis.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae.
OX NCBI_TaxID=1144750 {ECO:0000313|EMBL:SFJ49690.1, ECO:0000313|Proteomes:UP000199559};
RN [1] {ECO:0000313|Proteomes:UP000199559}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 28881 {ECO:0000313|Proteomes:UP000199559};
RA Varghese N., Submissions S.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|RuleBase:RU000492}.
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DR EMBL; FORM01000008; SFJ49690.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I3RUF8; -.
DR STRING; 1144750.SAMN05443431_108152; -.
DR Proteomes; UP000199559; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47959:SF13; ATP-DEPENDENT RNA HELICASE RHLE; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU000492};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU000492};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU000492};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU000492};
KW Reference proteome {ECO:0000313|Proteomes:UP000199559}.
FT DOMAIN 1..29
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 32..206
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 229..382
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 373..433
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 1..29
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
FT COMPBIAS 407..422
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 433 AA; 47213 MW; FE1C1E8BC068E113 CRC64;
MSFQSLGLSE ALLKAISKKG YTTPSPIQQK AIPPVLAGHD VLASAQTGTG KTAGFTLPLL
HILSENPKEK YRPIRALILT PTRELAAQVY ANVKEYSEFL NLRSAVIFGG VNQKPQAATI
RQGIDVLVAT PGRLIDLESQ GLLSLKRVEI FVLDEADRML DMGFLRDIER VMKLMPDKRQ
NLMFSATFSK DIRKLANGIL NRPVQVEATP ENTTVDAITQ KVYRVAKAKK TDLIIKLITD
GNWKQVLVFN RTKHGANKLV EKMIKAGIKA AAIHGNKSQG ARTKALAGFK SGSISVLVAT
DIAARGLDIP LLPHVINFEI PNISEDYVHR IGRTGRAGAN GEAISLVSAD ETTFLRDIQK
LIGMKLPVEI MEGFEPDPNA STAPIKPGQN RRQQPKSSKP KGDKSKSRGG NASSNSGGRN
RTKSKSRNSD SRR
//
