ID A0A1I4G5W5_9RHOB Unreviewed; 986 AA.
AC A0A1I4G5W5;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=2-oxoglutarate dehydrogenase E1 component {ECO:0000256|ARBA:ARBA00013321};
DE EC=1.2.4.2 {ECO:0000256|ARBA:ARBA00012280};
DE AltName: Full=Alpha-ketoglutarate dehydrogenase {ECO:0000256|ARBA:ARBA00030680};
GN ORFNames=SAMN04488004_11177 {ECO:0000313|EMBL:SFL24476.1};
OS Loktanella salsilacus.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Loktanella.
OX NCBI_TaxID=195913 {ECO:0000313|EMBL:SFL24476.1, ECO:0000313|Proteomes:UP000199550};
RN [1] {ECO:0000313|EMBL:SFL24476.1, ECO:0000313|Proteomes:UP000199550}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16199 {ECO:0000313|EMBL:SFL24476.1,
RC ECO:0000313|Proteomes:UP000199550};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: E1 component of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex which catalyzes the decarboxylation of 2-oxoglutarate, the
CC first step in the conversion of 2-oxoglutarate to succinyl-CoA and
CC CO(2). {ECO:0000256|ARBA:ARBA00003906}.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
CC -!- SUBUNIT: Homodimer. Part of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex composed of E1 (2-oxoglutarate dehydrogenase), E2
CC (dihydrolipoamide succinyltransferase) and E3 (dihydrolipoamide
CC dehydrogenase); the complex contains multiple copies of the three
CC enzymatic components (E1, E2 and E3). {ECO:0000256|ARBA:ARBA00011301}.
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DR EMBL; FOTF01000011; SFL24476.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I4G5W5; -.
DR STRING; 195913.SAMN04488004_11177; -.
DR OrthoDB; 9759785at2; -.
DR Proteomes; UP000199550; Unassembled WGS sequence.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR CDD; cd02016; TPP_E1_OGDC_like; 1.
DR Gene3D; 3.40.50.12470; -; 1.
DR Gene3D; 3.40.50.970; -; 1.
DR Gene3D; 3.40.50.11610; Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain; 1.
DR Gene3D; 1.10.287.1150; TPP helical domain; 1.
DR InterPro; IPR032106; 2-oxogl_dehyd_N.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR031717; KGD_C.
DR InterPro; IPR042179; KGD_C_sf.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR NCBIfam; TIGR00239; 2oxo_dh_E1; 1.
DR PANTHER; PTHR23152:SF4; 2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1; 1.
DR PANTHER; PTHR23152; 2-OXOGLUTARATE DEHYDROGENASE; 1.
DR Pfam; PF16078; 2-oxogl_dehyd_N; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF16870; OxoGdeHyase_C; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE 4: Predicted;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000199550};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052}.
FT DOMAIN 628..821
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
SQ SEQUENCE 986 AA; 109981 MW; A4509701DEC38FE7 CRC64;
MNDQSPNDVL HASSFLQGHN ADYVEQLYAR YADNPQAVDE SWRDFFAALG DAPADAKAEA
AGASWGRMDW PPVPNDDLTQ ALDGQWAQEP AAAGKKIAAK AEEKGVNLTE NQVRAAVLDS
IRALMIIRAY RIRGHLIADL DPLGMREVTA HPELDPASYG FTKADMDRPI FIDNVLGLEV
ATMAEIMAIV KRTYCGTFAL QYMHISNPDE AAWLKERIEG YGKEISFTQN GRKAILNKLV
EAEGFEKFLH VKYMGTKRFG LDGGESLIPA MEQIIKRGGQ LGMEEVVIGM PHRGRLSVLA
NVMQKPYRAI FNEFQGGSFK PEDVEGSGDV KYHLGASSDR EFDGNTVHLS LTANPSHLEA
VNPVVLGKVR AKQDQKNDKD RIKVMAILLH GDAAFAGQGV VAEGFQLSGI RGHRTGGTMH
IVVNNQIGFT TAPHFSRSSP YPTDIALMVE APIFHVNGDD PEAVVHAARV ATEFRQKFHK
DVVLDIICYR RFGHNEGDEP MFTNPVMYTK IKKQKTTLTL YTDRLVKDGL IPEGEIEDMK
ASFQSMLNAE FEAGKTYKPN KADWLDGRWS HLDRDKDNYQ RGETAISTEA MADIGKALTT
PPEHFATHKT IDRLLDAKKQ MFEGGTGFDW ATGEALAFGS LVLEGYPVRL AGQDSTRGTF
SQRHSALINQ NTEERYYPLN HVREGQAQYE VIDSMLSEYA VLGFEYGYSL AEPNALTLWE
AQFGDFANGA QIMFDQFISS GEAKWLRMSG LVCLLPHGYE GQGPEHSSAR LERFLTMCGN
DNWIVANCTT PANYFHILRR QLHRSYRKPL ILMTPKSLLR HKMAVSDAAD FTTGSSFHRV
LWDDAQKGHS DTQLVADDKI KRVVMCSGKV YYDLLEERDA RGITDTYILR FEQFYPFPAQ
SAVNELERFK NAEMVWCQEE PKNQGGWSFM EPNLEWCLTR IKAKHTRPVY AGRAAAASPA
TGLASQHKAQ QAALVAEALN IEGITK
//