ID A0A1I4TWA6_9PROT Unreviewed; 484 AA.
AC A0A1I4TWA6;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=Ribonuclease G {ECO:0000256|ARBA:ARBA00017719};
GN ORFNames=DEO56_05945 {ECO:0000313|EMBL:HBZ30125.1}, SAMN05421880_13522
GN {ECO:0000313|EMBL:SFM80907.1};
OS Nitrosomonas nitrosa.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC Nitrosomonadaceae; Nitrosomonas.
OX NCBI_TaxID=52442 {ECO:0000313|EMBL:SFM80907.1, ECO:0000313|Proteomes:UP000199561};
RN [1] {ECO:0000313|EMBL:SFM80907.1, ECO:0000313|Proteomes:UP000199561}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nm146 {ECO:0000313|EMBL:SFM80907.1,
RC ECO:0000313|Proteomes:UP000199561};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:HBZ30125.1, ECO:0000313|Proteomes:UP000264024}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UBA8641 {ECO:0000313|EMBL:HBZ30125.1};
RX PubMed=30148503; DOI=.1038/nbt.4229;
RA Parks D.H., Chuvochina M., Waite D.W., Rinke C., Skarshewski A.,
RA Chaumeil P.A., Hugenholtz P.;
RT "A standardized bacterial taxonomy based on genome phylogeny substantially
RT revises the tree of life.";
RL Nat. Biotechnol. 36:996-1004(2018).
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the RNase E/G family. RNase G subfamily.
CC {ECO:0000256|ARBA:ARBA00005663}.
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DR EMBL; DOVE01000155; HBZ30125.1; -; Genomic_DNA.
DR EMBL; FOUF01000035; SFM80907.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I4TWA6; -.
DR STRING; 52442.SAMN05421880_13522; -.
DR OrthoDB; 9804278at2; -.
DR Proteomes; UP000199561; Unassembled WGS sequence.
DR Proteomes; UP000264024; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR048583; RNase_E_G_thioredoxin-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR Pfam; PF20833; RNase_E_G_Thio; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000199561};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 39..115
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 484 AA; 54989 MW; 5689AE4542A287E3 CRC64;
MSNEILINVT PQETRVAVIE QGIVQELHIE RMSSRGIVGN IYNGQVSRVL PGMQSAFIDI
GMERAAFLHV GDIKELNVNG DQGRPIERLL HEGNNILVQV IKDAIGTKGA RLSTQISIAG
RLLVYLPHES HIGISQRIED SFERELLREK LQHVLPPEAK GGYIIRTMAE AATEADLRAD
IEYLHKLWLD IQNKSLVVSS PTLLYQDLDL SHRVLRDFVD DDTHRILVDS RETYQKLIIF
AQTYMSNVVD RIDHYTGERP LFDLYGVEEE IDRSLARRVN LKSGGYVIID QTEALTTMDV
NTGGYIGVRN FDDTIFKTNL EAAQVIARQL RLRNLGGIII IDFIDMENEE HKSAVLAEFN
KALMRDRTRM TVNGFTALGL VEMTRKRTRE SLAHILCEPC PTCQGRGQIR TAQTVCYEIL
RELLRVSRQF DANEFRILAS QQVIDLFLDE ESQNLAQLAD FIEKPVGLQV EASYTQEQYD
VILI
//
