ID A0A1I4W3J8_9BURK Unreviewed; 433 AA.
AC A0A1I4W3J8;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:SFN08053.1};
GN ORFNames=SAMN05444747_114136 {ECO:0000313|EMBL:SFN08053.1};
OS Variovorax sp. OV329.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=1882825 {ECO:0000313|EMBL:SFN08053.1, ECO:0000313|Proteomes:UP000199688};
RN [1] {ECO:0000313|EMBL:SFN08053.1, ECO:0000313|Proteomes:UP000199688}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OV329 {ECO:0000313|EMBL:SFN08053.1,
RC ECO:0000313|Proteomes:UP000199688};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FOUG01000014; SFN08053.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I4W3J8; -.
DR STRING; 1882825.SAMN05444747_114136; -.
DR Proteomes; UP000199688; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR046531; DUF6596.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR47756:SF1; BLL0085 PROTEIN; 1.
DR PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR Pfam; PF20239; DUF6596; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000199688}.
FT DOMAIN 27..86
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 127..178
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 196..296
FT /note="DUF6596"
FT /evidence="ECO:0000259|Pfam:PF20239"
SQ SEQUENCE 433 AA; 46611 MW; 71B27F9123E38383 CRC64;
MSGGANDKAE EAARRAIAGV WPIESARITA VVARMVRDVG VAEELAQDAL VSALQQWPHE
GLPDNPAAWL TAAAKHRALD WLRRSQMMER KHEEIAHTIE ALGGEPLAPA PDEGADEDIE
DDLLRLIFTA CHPVLAREAR VALALRVLCG LATDEIARAF LVPEPTIAQR IVRAKRSLRD
AKVPFEVPRA EALAPRLASV LEVVYLVFNE GYSATAGEHW MRTDLCAQAL RLGRVLAELV
PQAPEVHGLV ALMEIQASRS AARTDRQGAP ILLMDQDRSR WDQLLIRRGL AALERADGLG
GARGPYALQA AIAACHARAL RAGDTDWARI ASLYAALAVV EPSPVVDLNR AVAVSRAEGA
AAALPLVDAL VAEGALKSYH LLPAVRGDLL QSLGRLDEAR LAFEQAAALT RNERERALLR
ARAQACIGPQ GEG
//