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Database: UniProt
Entry: A0A1I4W3J8_9BURK
LinkDB: A0A1I4W3J8_9BURK
Original site: A0A1I4W3J8_9BURK 
ID   A0A1I4W3J8_9BURK        Unreviewed;       433 AA.
AC   A0A1I4W3J8;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:SFN08053.1};
GN   ORFNames=SAMN05444747_114136 {ECO:0000313|EMBL:SFN08053.1};
OS   Variovorax sp. OV329.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=1882825 {ECO:0000313|EMBL:SFN08053.1, ECO:0000313|Proteomes:UP000199688};
RN   [1] {ECO:0000313|EMBL:SFN08053.1, ECO:0000313|Proteomes:UP000199688}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=OV329 {ECO:0000313|EMBL:SFN08053.1,
RC   ECO:0000313|Proteomes:UP000199688};
RA   de Groot N.N.;
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; FOUG01000014; SFN08053.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1I4W3J8; -.
DR   STRING; 1882825.SAMN05444747_114136; -.
DR   Proteomes; UP000199688; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR046531; DUF6596.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR47756:SF1; BLL0085 PROTEIN; 1.
DR   PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR   Pfam; PF20239; DUF6596; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000199688}.
FT   DOMAIN          27..86
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          127..178
FT                   /note="RNA polymerase sigma factor 70 region 4 type 2"
FT                   /evidence="ECO:0000259|Pfam:PF08281"
FT   DOMAIN          196..296
FT                   /note="DUF6596"
FT                   /evidence="ECO:0000259|Pfam:PF20239"
SQ   SEQUENCE   433 AA;  46611 MW;  71B27F9123E38383 CRC64;
     MSGGANDKAE EAARRAIAGV WPIESARITA VVARMVRDVG VAEELAQDAL VSALQQWPHE
     GLPDNPAAWL TAAAKHRALD WLRRSQMMER KHEEIAHTIE ALGGEPLAPA PDEGADEDIE
     DDLLRLIFTA CHPVLAREAR VALALRVLCG LATDEIARAF LVPEPTIAQR IVRAKRSLRD
     AKVPFEVPRA EALAPRLASV LEVVYLVFNE GYSATAGEHW MRTDLCAQAL RLGRVLAELV
     PQAPEVHGLV ALMEIQASRS AARTDRQGAP ILLMDQDRSR WDQLLIRRGL AALERADGLG
     GARGPYALQA AIAACHARAL RAGDTDWARI ASLYAALAVV EPSPVVDLNR AVAVSRAEGA
     AAALPLVDAL VAEGALKSYH LLPAVRGDLL QSLGRLDEAR LAFEQAAALT RNERERALLR
     ARAQACIGPQ GEG
//
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