ID A0A1I4WLA4_9GAMM Unreviewed; 961 AA.
AC A0A1I4WLA4;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=oxoglutarate dehydrogenase (succinyl-transferring) {ECO:0000256|ARBA:ARBA00012280};
DE EC=1.2.4.2 {ECO:0000256|ARBA:ARBA00012280};
GN ORFNames=SAMN05216289_105150 {ECO:0000313|EMBL:SFN14591.1};
OS Dokdonella immobilis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Rhodanobacteraceae; Dokdonella.
OX NCBI_TaxID=578942 {ECO:0000313|EMBL:SFN14591.1, ECO:0000313|Proteomes:UP000198575};
RN [1] {ECO:0000313|EMBL:SFN14591.1, ECO:0000313|Proteomes:UP000198575}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CGMCC 1.7659 {ECO:0000313|EMBL:SFN14591.1,
RC ECO:0000313|Proteomes:UP000198575};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: E1 component of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex which catalyzes the decarboxylation of 2-oxoglutarate, the
CC first step in the conversion of 2-oxoglutarate to succinyl-CoA and
CC CO(2). {ECO:0000256|ARBA:ARBA00003906}.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
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DR EMBL; FOVF01000005; SFN14591.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I4WLA4; -.
DR STRING; 578942.SAMN05216289_105150; -.
DR OrthoDB; 9759785at2; -.
DR Proteomes; UP000198575; Unassembled WGS sequence.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR CDD; cd02016; TPP_E1_OGDC_like; 1.
DR Gene3D; 3.40.50.12470; -; 1.
DR Gene3D; 3.40.50.970; -; 1.
DR Gene3D; 3.40.50.11610; Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain; 1.
DR Gene3D; 1.10.287.1150; TPP helical domain; 1.
DR InterPro; IPR032106; 2-oxogl_dehyd_N.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR031717; KGD_C.
DR InterPro; IPR042179; KGD_C_sf.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR NCBIfam; TIGR00239; 2oxo_dh_E1; 1.
DR PANTHER; PTHR23152:SF4; 2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1; 1.
DR PANTHER; PTHR23152; 2-OXOGLUTARATE DEHYDROGENASE; 1.
DR Pfam; PF16078; 2-oxogl_dehyd_N; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF16870; OxoGdeHyase_C; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE 4: Predicted;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000198575};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052}.
FT DOMAIN 612..804
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
SQ SEQUENCE 961 AA; 105933 MW; 90ECEC7D2551D4FC CRC64;
MTSSTLLEQF QTTSALSGGN AAFIEELYER WLDDPNAVAP SWNTYFTSLK GRANGEVGHS
GVIARIEAAQ RSGPKRRAAS SAVDNVEAQK QAGVLKLVTA YRSRGHLAAN LDPLDLANTY
GQEELEALGL LPRPAAPDLE LAFHGLSNAD LDTEFNTGSL SGPQRLKLRD LIALLKATYA
TTIGVEFMHI SDASQRQWMH EKMERAGGRF GLSADEKKHL LGKLTQADGL ERYLHTKYVG
QKRFALEGGD SLIPMLDEML RRGGSAGLKD MVIGMAHRGR LNVLVNILGK PPSKLFDEFE
GRFEHSEDPA HSGDVKYHMG FSANVRTPGR TVHVALAFNP SHLEIVDPVV AGSVRARQTH
RADSDREHVV PVLIHGDAAF AGQGVVMELF NMSQANGFCV GGTIHIVVNN QVGFTISNPH
DARSTLYCTD VAKMVNAPVF HVNGDDPEAV LFVSRLAFDY RQKFKRDVVI DLVCYRRHGH
NEADEPAATQ PLMYQVIRAR KPLRELYSET LVAEGVLAAA DATAMVDDYR KLLEAGAPIP
GVDADYHDPH GVDWSKHLAN DIFEVVKTGI SKKSMTAVNA ELLRVPPGIT LHSRVAKIYA
DRDKMAAGKQ EIDWGFAENL AYGSLVADGY NLRLVGQDAG RGTFFHRHAV MHDQKSGSHH
VPLKTIRADA SVEVIDSLLS EEAVMAFEYG YATAKPNTLV IWEAQFGDFA NGAQVVIDQF
ISSGEAKWGR LCGIVLLLPH GYEGQGPEHS SARLERYLQL CAVENMQVCV PTTPAQMFHM
MRRQMLRAAR KPLIVMTPKS LLRHKMAVSS LDDLVNGRFH LVIPDLTAKN AKKVKRVVFC
AGKVYYDLVE EAARREISDV AILRVEQLYP FPRTEVKAEL EKYPAAKEVI WCQEEPMNQG
AWYQIKHHFQ AVVAERHTVA YAGRPRSPAP ACGHLGRHLA EQAALVELAL VSPISSDYAL
E
//