ID A0A1I4YJF6_9PROT Unreviewed; 755 AA.
AC A0A1I4YJF6;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE RecName: Full=dTDP-4-dehydrorhamnose reductase {ECO:0000256|ARBA:ARBA00017099, ECO:0000256|RuleBase:RU364082};
DE EC=1.1.1.133 {ECO:0000256|ARBA:ARBA00012929, ECO:0000256|RuleBase:RU364082};
GN ORFNames=SAMN05216386_0731 {ECO:0000313|EMBL:SFN38171.1};
OS Nitrosospira briensis.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC Nitrosomonadaceae; Nitrosospira.
OX NCBI_TaxID=35799 {ECO:0000313|EMBL:SFN38171.1, ECO:0000313|Proteomes:UP000183107};
RN [1] {ECO:0000313|Proteomes:UP000183107}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nsp8 {ECO:0000313|Proteomes:UP000183107};
RA Varghese N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to
CC yield dTDP-L-rhamnose. {ECO:0000256|RuleBase:RU364082}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=dTDP-beta-L-rhamnose + NADP(+) = dTDP-4-dehydro-beta-L-
CC rhamnose + H(+) + NADPH; Xref=Rhea:RHEA:21796, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:57510, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349,
CC ChEBI:CHEBI:62830; EC=1.1.1.133;
CC Evidence={ECO:0000256|ARBA:ARBA00000079,
CC ECO:0000256|RuleBase:RU364082};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|RuleBase:RU364082};
CC Note=Binds 1 Mg(2+) ion per monomer. {ECO:0000256|RuleBase:RU364082};
CC -!- PATHWAY: Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004781, ECO:0000256|RuleBase:RU364082}.
CC -!- SIMILARITY: Belongs to the dTDP-4-dehydrorhamnose reductase family.
CC {ECO:0000256|ARBA:ARBA00010944, ECO:0000256|RuleBase:RU364082}.
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DR EMBL; FOVJ01000001; SFN38171.1; -; Genomic_DNA.
DR RefSeq; WP_074794740.1; NZ_FOVJ01000001.1.
DR AlphaFoldDB; A0A1I4YJF6; -.
DR UniPathway; UPA00124; -.
DR Proteomes; UP000183107; Unassembled WGS sequence.
DR GO; GO:0008831; F:dTDP-4-dehydrorhamnose reductase activity; IEA:UniProtKB-EC.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR GO; GO:0019305; P:dTDP-rhamnose biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd05254; dTDP_HR_like_SDR_e; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR Gene3D; 3.90.25.10; UDP-galactose 4-epimerase, domain 1; 1.
DR InterPro; IPR005913; dTDP_dehydrorham_reduct.
DR InterPro; IPR001360; Glyco_hydro_1.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR029903; RmlD-like-bd.
DR PANTHER; PTHR10491; DTDP-4-DEHYDRORHAMNOSE REDUCTASE; 1.
DR PANTHER; PTHR10491:SF4; METHIONINE ADENOSYLTRANSFERASE 2 SUBUNIT BETA; 1.
DR Pfam; PF00232; Glyco_hydro_1; 1.
DR Pfam; PF04321; RmlD_sub_bind; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
PE 3: Inferred from homology;
KW NADP {ECO:0000256|RuleBase:RU364082};
KW Oxidoreductase {ECO:0000256|RuleBase:RU364082};
KW Reference proteome {ECO:0000313|Proteomes:UP000183107}.
FT DOMAIN 460..714
FT /note="RmlD-like substrate binding"
FT /evidence="ECO:0000259|Pfam:PF04321"
FT REGION 735..755
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 755 AA; 84644 MW; 004A249F9EE045FB CRC64;
MSGEEDQGAT EALELWGGLE CTVNRVLDTY FSQMDRNGHI HRLCDLERFA SLGIRSIRYP
VLWEHMAPDG LDRIDWSWPD DRLPALRERG ITPIVGLVHH GSGPQYTSLV DPGFAEKLAV
FAGAVAQRYP WVEHYTPVNE PLTTARFSGL YGLWYPHGSD ERTFVQALLN QCRAVVLSMR
AIRQVNPDAK LVQTDDLGKA YSTPQLSGLA EFYNARRWLA WDLLCGKVGQ EHPLWNYLVG
TGIEPSQVLW FKDNVCHPEI IGINYYITSE RWLDERVERY PGQHITDYHG YRFVDMEPVR
VLATPSTGVE HLLTEAWERY RLPLAITEVH IGASREDQMR WLLEMWQAAR NARQRGIDIR
AVTVWALLGS YDWNCLVTAC KGYYEPGPFD VRSALPRPTA VAGLMRELAA GRQPSHPVLK
GQGWWRRADR LTCKPVATPT AITSLHSKYK SSVNGTMRPI LVTGATGTLG RAFAIICGKR
NVAGILLSRQ EMDIAVRASV ECAVARYQPW AIINASGYVN VDNAESDIDR CFRENAVGPS
VLAALCRERD IQLLTFSSDL VFDGRQASPY RESDTVCPLN HYGRSKVEAE RRVLDHHPDA
LVVRTSAFFG PWDIYNFVTL ALKTLAQEER FSASTDITVS PTYVPDLVNT CLDLLIDKEA
GIWHLTNGEP VTWVELALKA AKKAGIDTSR LDGRCGNELG YVAVRPLYSA LSSERGILLP
SLDDALDRYI ESRRQEASAE AEQNKSGRRG SGMVA
//