ID A0A1I5EYI8_PARPN Unreviewed; 558 AA.
AC A0A1I5EYI8;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Ribonuclease J {ECO:0000313|EMBL:RKS52495.1};
GN ORFNames=BDE18_1822 {ECO:0000313|EMBL:RKS52495.1}, HYQ43_10120
GN {ECO:0000313|EMBL:QLH14658.1};
OS Paracoccus pantotrophus (Thiosphaera pantotropha).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Paracoccus.
OX NCBI_TaxID=82367 {ECO:0000313|EMBL:RKS52495.1, ECO:0000313|Proteomes:UP000273626};
RN [1] {ECO:0000313|EMBL:RKS52495.1, ECO:0000313|Proteomes:UP000273626}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35512 / DSM 2944 / CIP 106514 / LMD 82.5 / NBRC 102493 /
RC NCCB 82005 / GB17 {ECO:0000313|Proteomes:UP000273626}, and DSM 2944
RC {ECO:0000313|EMBL:RKS52495.1};
RA Goeker M.;
RT "Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II
RT (KMG-II): from individual species to whole genera.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:QLH14658.1, ECO:0000313|Proteomes:UP000509322}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACCC10489 {ECO:0000313|EMBL:QLH14658.1,
RC ECO:0000313|Proteomes:UP000509322};
RA Si Y.;
RT "The complete genome of Paracoccus pantotrophus ACCC 10489.";
RL Submitted (JUL-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP058690; QLH14658.1; -; Genomic_DNA.
DR EMBL; RBLI01000001; RKS52495.1; -; Genomic_DNA.
DR RefSeq; WP_024843151.1; NZ_RIAQ01000012.1.
DR AlphaFoldDB; A0A1I5EYI8; -.
DR GeneID; 51371484; -.
DR OrthoDB; 9770211at2; -.
DR Proteomes; UP000273626; Unassembled WGS sequence.
DR Proteomes; UP000509322; Chromosome 2.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd07714; RNaseJ_MBL-fold; 1.
DR Gene3D; 3.10.20.580; -; 1.
DR Gene3D; 3.40.50.10710; Metallo-hydrolase/oxidoreductase; 1.
DR Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR InterPro; IPR001279; Metallo-B-lactamas.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR InterPro; IPR011108; RMMBL.
DR InterPro; IPR042173; RNase_J_2.
DR InterPro; IPR041636; RNase_J_C.
DR PANTHER; PTHR43694; RIBONUCLEASE J; 1.
DR PANTHER; PTHR43694:SF1; RIBONUCLEASE J; 1.
DR Pfam; PF00753; Lactamase_B; 1.
DR Pfam; PF07521; RMMBL; 1.
DR Pfam; PF17770; RNase_J_C; 1.
DR SMART; SM00849; Lactamase_B; 1.
DR SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 17..207
FT /note="Metallo-beta-lactamase"
FT /evidence="ECO:0000259|SMART:SM00849"
SQ SEQUENCE 558 AA; 60760 MW; 8B228A960C253628 CRC64;
MAERLIYLPL GGAGEIGMNA YVYGYGQPGR ERLIVVDLGV TFGDMDSAPG IDLIMADVAW
LEANRDRIDA IFITHGHEDH VGALGLLWPR LQKPVHCRRF TGALARLKLE EAGQPVDQLH
IHAPRPDVVT AGPFRVQFVP VSHSIPESSA LIIDTPAGRI VHTGDFKLDG TPVVGEAFDP
ILWHDIANEG QGIKVLTCDS TNVFSPHPGR SEAVLATPLL DFVMAQRQMV VATTFASNIA
RLKTLAEAGI AAGRKICLLG RAMRRMVTVG IETGILTNFP SFISPEEASE LPRDKVMLIV
TGSQGERRAA SAQLSRGRYL GIELKEGDSF LFSSRTIPGN ERGVIRIMNA LSEMGVDLYD
ADDGLYHVSG HANRPDIEAV HDLLKPQIVI PMHGEHMHLR EHAKLAEARG IHSVVATNGT
MLDLSGEAPR VVDQIDTGRI YLDGTVLIGA MDGVVRDRIR MALNGHAMVS VIIDEDDTPL
PDAWVELSGL PEKGRAGVPL ARNIEAELAG FLERADDRTV MDDDRLEEAI RKITRQVSME
EIGKKPEVTV VISRLAAE
//
