ID A0A1I5W6F0_9BURK Unreviewed; 418 AA.
AC A0A1I5W6F0;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:SFQ15328.1};
GN ORFNames=SAMN05443579_12528 {ECO:0000313|EMBL:SFQ15328.1};
OS Variovorax sp. PDC80.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=1882827 {ECO:0000313|EMBL:SFQ15328.1, ECO:0000313|Proteomes:UP000199369};
RN [1] {ECO:0000313|Proteomes:UP000199369}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PDC80 {ECO:0000313|Proteomes:UP000199369};
RA Varghese N., Submissions S.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FOWG01000025; SFQ15328.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I5W6F0; -.
DR OrthoDB; 9780299at2; -.
DR Proteomes; UP000199369; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR046531; DUF6596.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR47756:SF2; BLL6612 PROTEIN; 1.
DR PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR Pfam; PF20239; DUF6596; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000199369}.
FT DOMAIN 13..79
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 116..166
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 184..287
FT /note="DUF6596"
FT /evidence="ECO:0000259|Pfam:PF20239"
SQ SEQUENCE 418 AA; 45805 MW; 1B03B934356E953E CRC64;
MTDPVRASLE AVYRGESRRI FATLVRLLGD FDRAEEALHE AFRAALEQWP AQGVPANPRA
WLVSAGRFKA IDAIRRQARF SPWDESAERA EALADPAPGW VADSDELEDD RLRLVFTCCH
PALSPDAQVA LTLREVCGLA TEEIARAFMV PAPTIAQRIV RAKARIRDAR IPYQVPTRTE
LSERLDAVLR VVYLVFNEGY AASSGQSLTR ADLSAEAIRL GRLLVELLPG AEAAPEALGL
LALMLLHDAR RAARTSAQGE IVLLDQQDRG LWHRAQIEEG AALVERALRS RRFGPYALQA
AIAAVHAEAE RAEATDWPQI VGLYDVLLRL DPSPVAELNR AAAIAMRDGP AAGLALVDAL
FARGELADYH LAHGARAELC RRLGRLGEAR GAYERALALA RQQPERQFLA RQLASLPG
//
