ID   A0A1I5WLW8_9BACT        Unreviewed;       543 AA.
AC   A0A1I5WLW8;
DT   22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 1.
DT   24-JAN-2024, entry version 17.
DE   SubName: Full=Putative peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:SFQ20813.1};
GN   ORFNames=SAMN05444277_106279 {ECO:0000313|EMBL:SFQ20813.1};
OS   Parafilimonas terrae.
OC   Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC   Parafilimonas.
OX   NCBI_TaxID=1465490 {ECO:0000313|EMBL:SFQ20813.1, ECO:0000313|Proteomes:UP000199031};
RN   [1] {ECO:0000313|EMBL:SFQ20813.1, ECO:0000313|Proteomes:UP000199031}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 28286 {ECO:0000313|EMBL:SFQ20813.1,
RC   ECO:0000313|Proteomes:UP000199031};
RA   de Groot N.N.;
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC       {ECO:0000256|ARBA:ARBA00004752}.
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DR   EMBL; FOXQ01000006; SFQ20813.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1I5WLW8; -.
DR   STRING; 1465490.SAMN05444277_106279; -.
DR   OrthoDB; 9778545at2; -.
DR   UniPathway; UPA00219; -.
DR   Proteomes; UP000199031; Unassembled WGS sequence.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR   CDD; cd16913; YkuD_like; 1.
DR   Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR   Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 1.
DR   InterPro; IPR005490; LD_TPept_cat_dom.
DR   InterPro; IPR045380; LD_TPept_scaffold_dom.
DR   InterPro; IPR002477; Peptidoglycan-bd-like.
DR   InterPro; IPR036365; PGBD-like_sf.
DR   InterPro; IPR036366; PGBDSf.
DR   InterPro; IPR038063; Transpep_catalytic_dom.
DR   PANTHER; PTHR41533:SF2; BLR7131 PROTEIN; 1.
DR   PANTHER; PTHR41533; L,D-TRANSPEPTIDASE HI_1667-RELATED; 1.
DR   Pfam; PF01471; PG_binding_1; 1.
DR   Pfam; PF20142; Scaffold; 1.
DR   Pfam; PF03734; YkuD; 1.
DR   SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR   SUPFAM; SSF47090; PGBD-like; 1.
DR   PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000199031};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          64..205
FT                   /note="L,D-transpeptidase scaffold"
FT                   /evidence="ECO:0000259|Pfam:PF20142"
FT   DOMAIN          234..289
FT                   /note="Peptidoglycan binding-like"
FT                   /evidence="ECO:0000259|Pfam:PF01471"
FT   DOMAIN          320..467
FT                   /note="L,D-transpeptidase catalytic"
FT                   /evidence="ECO:0000259|Pfam:PF03734"
SQ   SEQUENCE   543 AA;  61719 MW;  872086917A9E113D CRC64;
     MKKLLWAILF TGIGVYSCKS KQKEKIEVDK SINQKTSFNN LFIDSNTIKV FLTKHPEYTK
     FIQQYSDFYK LRNYQCAWFD SSGIGEQAYN FMNLLANAVD TYSDSSLYNK KLSDEVDEFK
     TDTSNKNIKT TQNITDTELK LTGQFFAYAS KIYGGSDINI QELGWFIPRK KLNLSVMLDS
     LIANKSDIKK TEIPLSSAYK KLLDYLSVYR KIAQTTPWDS LPYPEKALHK GATSPEIITI
     KKRLFALGDM EESDTTDIFD SLMLSAVKKF QVRMGVSPDG VIGKSFITQL NVTPAKRIEQ
     ILINLERLRW MPPMNDSTNS IVVNIPEYKM YVYDSGKLQF PMNVVVGSSA TGTVIFTGNL
     KYIVFSPYWN IPASIVKKEI LPGIARNPNY LAAHHMEQFG MQAKGVPAIR QLPGADNALG
     RVKFLFPNNF DIYFHDTNNR GAFNASNRNI SHGCIRLSEP KKLAMYLLRY DTATYNNQTV
     DSLMSLDKEK WVTLKKPVPV VISYYTAFVD NNGSLNFRRD IYKHDSAMAA KLFTGNSNLM
     ALK
//