ID A0A1I6LIH6_9SPHN Unreviewed; 274 AA.
AC A0A1I6LIH6;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Cold-shock DNA-binding protein family {ECO:0000313|EMBL:SFS03193.1};
GN ORFNames=SAMN05192580_2772 {ECO:0000313|EMBL:SFS03193.1};
OS Sphingomonas jatrophae.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=1166337 {ECO:0000313|EMBL:SFS03193.1, ECO:0000313|Proteomes:UP000198824};
RN [1] {ECO:0000313|EMBL:SFS03193.1, ECO:0000313|Proteomes:UP000198824}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S5-249 {ECO:0000313|EMBL:SFS03193.1,
RC ECO:0000313|Proteomes:UP000198824};
RA de Groot N.N.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FOZG01000002; SFS03193.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I6LIH6; -.
DR STRING; 1166337.SAMN05192580_2772; -.
DR OrthoDB; 9791685at2; -.
DR Proteomes; UP000198824; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 2.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF60; LD37574P; 1.
DR Pfam; PF00313; CSD; 2.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 2.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 2.
DR PROSITE; PS51857; CSD_2; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:SFS03193.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000198824}.
FT DOMAIN 104..169
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 206..272
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 172..203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..22
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 274 AA; 27352 MW; 5432DA57365EFF51 CRC64;
MSFDRGRRGQ RGGKDKREGF GGDDFYGGGG GFGDRGGFGG GGGYGGGGGY GGGGGGYGDR
GGFGGGDRGG FGGGGGGYGG GGGGGFRGGG GGGGRGMPAQ VIGEGKGVVK FFNAQKGFGF
VVRDDGGEDV FVHISAVEQA GLSGLAEGQP LEFTLVDRGG RISATDLKIE GEPMPVTDRA
PPRDAGGMGG PGGARGGPQR QLTGEKASGT VKFFNAMKGF GFIQRDDGQP DAFVHISAVE
RAGMTSLNEG DRLEFELEVD RRGKYAAVNL SPLQ
//