ID A0A1I8J6V8_9PLAT Unreviewed; 291 AA.
AC A0A1I8J6V8;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE SubName: Full=CSD_1 domain-containing protein {ECO:0000313|WBParaSite:maker-uti_cns_0046216-snap-gene-0.4-mRNA-1};
GN ORFNames=BOX15_Mlig010121g1 {ECO:0000313|EMBL:PAA90789.1},
GN BOX15_Mlig010121g3 {ECO:0000313|EMBL:PAA48188.1};
OS Macrostomum lignano.
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes;
OC Rhabditophora; Macrostomorpha; Macrostomida; Macrostomidae; Macrostomum.
OX NCBI_TaxID=282301 {ECO:0000313|Proteomes:UP000095280, ECO:0000313|WBParaSite:maker-uti_cns_0046216-snap-gene-0.4-mRNA-1};
RN [1] {ECO:0000313|WBParaSite:maker-uti_cns_0046216-snap-gene-0.4-mRNA-1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (NOV-2016) to UniProtKB.
RN [2] {ECO:0000313|EMBL:PAA48188.1, ECO:0000313|Proteomes:UP000215902}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DV1 {ECO:0000313|EMBL:PAA48188.1};
RC TISSUE=Whole organism {ECO:0000313|EMBL:PAA48188.1};
RA Berezikov E.;
RT "A platform for efficient transgenesis in Macrostomum lignano, a flatworm
RT model organism for stem cell research.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; NIVC01004211; PAA48188.1; -; Genomic_DNA.
DR EMBL; NIVC01000103; PAA90789.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1I8J6V8; -.
DR STRING; 282301.A0A1I8J6V8; -.
DR WBParaSite; maker-uti_cns_0046216-snap-gene-0.4-mRNA-1; maker-uti_cns_0046216-snap-gene-0.4-mRNA-1; maker-uti_cns_0046216-snap-gene-0.4.
DR Proteomes; UP000095280; Unplaced.
DR Proteomes; UP000215902; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF60; LD37574P; 1.
DR Pfam; PF00313; CSD; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000215902}.
FT DOMAIN 27..96
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 88..137
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 234..291
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 96..110
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 272..291
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 291 AA; 31289 MW; 0F89EA90550213A7 CRC64;
MTDKETTQEP KSGGEEVKKE KKVVATKVTG TVKWFNVKNG YGFINRDDNK DDIFVHQTAI
IKNNPNKWQR SVGDNEKVEF DVVEGEKGLE ASNVTGPDGS PVQGSQYASN RFRPGGGRGG
PRGGFRGGYG DGFGRRPPGR YSRPYMYGRG GGMPMGDRGL PGPEYGMVPM HPAFPGPYAY
RGVGGGRPMR RPAYYDPGMI SSYRGGYAGG LPAQAGGGPP MPYQYPPVYF HRGGGGFRGS
RGGGRWRGRG GANRRRDSGG EAPPAAVDSN NEKSNRKNDG KTGEDVGEQQ K
//
