ID A0A1J0LLC4_9FLAO Unreviewed; 364 AA.
AC A0A1J0LLC4;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000256|HAMAP-Rule:MF_00093};
GN ORFNames=UJ101_01541 {ECO:0000313|EMBL:APD07057.1};
OS Flavobacteriaceae bacterium UJ101.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae.
OX NCBI_TaxID=1150389 {ECO:0000313|EMBL:APD07057.1, ECO:0000313|Proteomes:UP000183895};
RN [1] {ECO:0000313|EMBL:APD07057.1, ECO:0000313|Proteomes:UP000183895}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UJ101 {ECO:0000313|EMBL:APD07057.1,
RC ECO:0000313|Proteomes:UP000183895};
RA Oh H.-M., Yang J.-A., Yang S.-H., Kwon K.-K.;
RT "Complete Genome Sequence of Flavobacteriales bacterium UJ101.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000256|ARBA:ARBA00002986, ECO:0000256|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000256|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000256|ARBA:ARBA00010835, ECO:0000256|HAMAP-
CC Rule:MF_00093}.
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DR EMBL; CP016269; APD07057.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1J0LLC4; -.
DR STRING; 1150389.UJ101_01541; -.
DR KEGG; fbu:UJ101_01541; -.
DR OrthoDB; 9806673at2; -.
DR Proteomes; UP000183895; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.70.1660; -; 1.
DR Gene3D; 6.10.140.1950; -; 1.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR NCBIfam; TIGR00019; prfA; 1.
DR PANTHER; PTHR43804; LD18447P; 1.
DR PANTHER; PTHR43804:SF7; LD18447P; 1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; Release factor; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00093};
KW Methylation {ECO:0000256|ARBA:ARBA00022481, ECO:0000256|HAMAP-
KW Rule:MF_00093}; Protein biosynthesis {ECO:0000256|HAMAP-Rule:MF_00093};
KW Reference proteome {ECO:0000313|Proteomes:UP000183895}.
FT DOMAIN 229..245
FT /note="Prokaryotic-type class I peptide chain release
FT factors"
FT /evidence="ECO:0000259|PROSITE:PS00745"
FT COILED 27..97
FT /evidence="ECO:0000256|SAM:Coils"
FT MOD_RES 236
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00093"
SQ SEQUENCE 364 AA; 41296 MW; 2A94412283B484D2 CRC64;
MSSLLTQLQA LKQRFDEVAD LIIQPEVISD QKRYAQLNKQ YKDLEKVVEV YKQYKAKLDV
IAEADEIIAD GSDAEMVEMA KMEKEEAKSA LPKMEEDIKF LLIPKDPEDD KNVIVELRAG
TGGDEACIFV EDMFRMYVMY FKEKGWSYEV VNSTEGGTKG YKELVLEVTG NAVYGTMKFE
SGVHRVQRVP ETESQGRVHT SAITIAVLPE AEEVDVELNM SDVRRDTFRA SGAGGQHVNK
TESAIRLTHI PTGIVAECQD GRSQHKNYEK ALQVLRTRMY QVELEKKQAE RAAERKSLVS
SGDRSAKIRT YNYPQGRVTD HRINKSMYNL ADYMNGNCQE MIDALKMHEN TEKLKAQEEG
AQSL
//
